Difference between revisions of "PWY-6549"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
+
** UMP biosynthesis I
 
* Synonym(s):
 
* Synonym(s):
−
** (R)- and (S)-3-hydroxybutyrate biosynthesis
+
** uridine-5'-phosphate biosynthesis I
 +
** de novo biosynthesis of uridine-5'-phosphate I
 +
** de novo biosynthesis of uridine-5'-monophosphate I
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''3''' reactions found over '''5''' reactions in the full pathway
+
  '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
+
* [[ASPCARBTRANS-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13527]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CARBPSYN-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[Tiso_gene_16181]]
+
*** [[Tiso_gene_4976]]
−
*** [[Tiso_gene_15327]]
+
*** [[Tiso_gene_4975]]
−
*** [[Tiso_gene_17451]]
+
*** [[Tiso_gene_4685]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
−
*** [[orthology-athaliana]]
+
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[DIHYDROOROT-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15379]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[DIHYDROOROTATE-DEHYDROGENASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_4735]]
 +
*** [[Tiso_gene_5280]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN-11662]]
+
* [[OROPRIBTRANS-RXN]]
−
** 7 associated gene(s):
+
** 3 associated gene(s):
−
*** [[Tiso_gene_5857]]
+
*** [[Tiso_gene_11163]]
−
*** [[Tiso_gene_16703]]
+
*** [[Tiso_gene_18647]]
−
*** [[Tiso_gene_14027]]
+
*** [[Tiso_gene_11164]]
−
*** [[Tiso_gene_14262]]
+
** 4 reconstruction source(s) associated:
−
*** [[Tiso_gene_14026]]
+
*** [[orthology-athaliana]]
−
*** [[Tiso_gene_18838]]
+
*** [[annotation-in-silico_annotation]]
−
*** [[Tiso_gene_18839]]
+
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[OROTPDECARB-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_20050]]
 +
*** [[Tiso_gene_18647]]
 
** 5 reconstruction source(s) associated:
 
** 5 reconstruction source(s) associated:
−
*** [[annotation-experimental_annotation]]
 
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
*** [[orthology-creinhardtii]]
+
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
−
* [[RXN-5901]]
+
*** [[manual-primary_network]]
−
** 9 associated gene(s):
+
−
*** [[Tiso_gene_6562]]
+
−
*** [[Tiso_gene_136]]
+
−
*** [[Tiso_gene_500]]
+
−
*** [[Tiso_gene_5425]]
+
−
*** [[Tiso_gene_6563]]
+
−
*** [[Tiso_gene_135]]
+
−
*** [[Tiso_gene_10876]]
+
−
*** [[Tiso_gene_5424]]
+
−
*** [[Tiso_gene_13394]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14251 RXN-14251]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14255 RXN-14255]
 
 
== External links  ==
 
== External links  ==
 +
* ECOCYC:
 +
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5686 PWY-5686]
 +
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)}}
+
{{#set: common name=UMP biosynthesis I}}
−
{{#set: common name=(R)- and (S)-3-hydroxybutyrate biosynthesis}}
+
{{#set: common name=uridine-5'-phosphate biosynthesis I|de novo biosynthesis of uridine-5'-phosphate I|de novo biosynthesis of uridine-5'-monophosphate I}}
−
{{#set: reaction found=3}}
+
{{#set: reaction found=6}}
−
{{#set: total reaction=5}}
+
{{#set: total reaction=6}}
−
{{#set: completion rate=60.0}}
+
{{#set: completion rate=100.0}}

Revision as of 16:19, 21 March 2018

Pathway PWY-5686

  • taxonomic range:
  • common name:
    • UMP biosynthesis I
  • Synonym(s):
    • uridine-5'-phosphate biosynthesis I
    • de novo biosynthesis of uridine-5'-phosphate I
    • de novo biosynthesis of uridine-5'-monophosphate I

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6549&oldid=33528"