Difference between revisions of "PWY-6549"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
** UMP biosynthesis I
+
** L-glutamine biosynthesis III
 
* Synonym(s):
 
* Synonym(s):
** uridine-5'-phosphate biosynthesis I
+
** L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)
** de novo biosynthesis of uridine-5'-phosphate I
+
** de novo biosynthesis of uridine-5'-monophosphate I
+
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''6''' reactions found over '''6''' reactions in the full pathway
+
  '''6''' reactions found over '''9''' reactions in the full pathway
* [[ASPCARBTRANS-RXN]]
+
* [[ACONITATEDEHYDR-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
*** [[Tiso_gene_13527]]
+
*** [[Tiso_gene_13007]]
** 7 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
*** [[orthology-esiliculosus]]
 
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[orthology-athaliana]]
 
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[CITSYN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18030]]
 +
*** [[Tiso_gene_9601]]
 +
*** [[Tiso_gene_9603]]
 +
*** [[Tiso_gene_9602]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
*** [[orthology-creinhardtii]]
+
*** [[annotation-in-silico_annotation]]
* [[CARBPSYN-RXN]]
+
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
*** [[Tiso_gene_4976]]
+
*** [[Tiso_gene_1773]]
*** [[Tiso_gene_4975]]
+
*** [[Tiso_gene_2581]]
*** [[Tiso_gene_4685]]
+
*** [[Tiso_gene_1154]]
** 4 reconstruction source(s) associated:
+
** 5 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[manual-primary_network]]
+
*** [[orthology-athaliana]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
* [[DIHYDROOROT-RXN]]
+
* [[GLUTAMINESYN-RXN]]
** 1 associated gene(s):
+
** 4 associated gene(s):
*** [[Tiso_gene_15379]]
+
*** [[Tiso_gene_14842]]
** 5 reconstruction source(s) associated:
+
*** [[Tiso_gene_13754]]
*** [[annotation-in-silico_annotation]]
+
*** [[Tiso_gene_13820]]
*** [[manual-primary_network]]
+
*** [[Tiso_gene_6647]]
*** [[orthology-creinhardtii]]
+
** 6 reconstruction source(s) associated:
*** [[orthology-synechocystis]]
+
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
* [[DIHYDROOROTATE-DEHYDROGENASE-RXN]]
+
*** [[orthology-esiliculosus]]
** 2 associated gene(s):
+
*** [[Tiso_gene_4735]]
+
*** [[Tiso_gene_5280]]
+
** 2 reconstruction source(s) associated:
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[orthology-esiliculosus]]
 
* [[OROPRIBTRANS-RXN]]
 
** 3 associated gene(s):
 
*** [[Tiso_gene_11163]]
 
*** [[Tiso_gene_18647]]
 
*** [[Tiso_gene_11164]]
 
** 4 reconstruction source(s) associated:
 
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
*** [[annotation-in-silico_annotation]]
 
 
*** [[orthology-synechocystis]]
 
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[manual-primary_network]]
* [[OROTPDECARB-RXN]]
+
* [[ISOCITDEH-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
*** [[Tiso_gene_20050]]
+
*** [[Tiso_gene_18262]]
*** [[Tiso_gene_18647]]
+
*** [[Tiso_gene_10809]]
** 5 reconstruction source(s) associated:
+
** 4 reconstruction source(s) associated:
*** [[orthology-athaliana]]
+
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[orthology-synechocystis]]
 
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
*** [[manual-primary_network]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: taxonomic range=TAX-3193}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
{{#set: common name=L-glutamine biosynthesis III}}
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)}}
{{#set: taxonomic range=TAX-2}}
+
{{#set: common name=UMP biosynthesis I}}
+
{{#set: common name=uridine-5'-phosphate biosynthesis I|de novo biosynthesis of uridine-5'-phosphate I|de novo biosynthesis of uridine-5'-monophosphate I}}
+
 
{{#set: reaction found=6}}
 
{{#set: reaction found=6}}
{{#set: total reaction=6}}
+
{{#set: total reaction=9}}
{{#set: completion rate=100.0}}
+
{{#set: completion rate=67.0}}

Latest revision as of 20:39, 21 March 2018

Pathway PWY-6549

  • taxonomic range:
  • common name:
    • L-glutamine biosynthesis III
  • Synonym(s):
    • L-glutamine biosynthesis (nitrogen remobilization from senescing leaves)

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links