Difference between revisions of "PWY-6661"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** 3-dehydr...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** folic_acid_synthesis_protein
+
** 3-dehydroquinate_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
+
** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c]
+
** 1 [[SHIKIMATE]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c]
+
** 1 shikimate[c] '''+''' 1 ATP[c] '''<=>''' 1 shikimate 3-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11659]]
+
* [[Tiso_gene_12435]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_3974]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
+
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[athaliana]]
 
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22291 P22291]
+
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
−
** [http://www.uniprot.org/uniprot/P26281 P26281]
+
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
−
** [http://www.uniprot.org/uniprot/O84619 O84619]
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
+
** [http://www.uniprot.org/uniprot/P43880 P43880]
−
** [http://www.uniprot.org/uniprot/O66550 O66550]
+
** [http://www.uniprot.org/uniprot/P63600 P63600]
−
** [http://www.uniprot.org/uniprot/O25680 O25680]
+
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
−
** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
+
** [http://www.uniprot.org/uniprot/P37944 P37944]
−
** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
+
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
−
** [http://www.uniprot.org/uniprot/P64143 P64143]
+
** [http://www.uniprot.org/uniprot/P10880 P10880]
−
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
+
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
−
** [http://www.uniprot.org/uniprot/P82602 P82602]
+
** [http://www.uniprot.org/uniprot/P34003 P34003]
−
** [http://www.uniprot.org/uniprot/P29252 P29252]
+
** [http://www.uniprot.org/uniprot/P43906 P43906]
−
** [http://www.uniprot.org/uniprot/P72736 P72736]
+
** [http://www.uniprot.org/uniprot/P72796 P72796]
−
** [http://www.uniprot.org/uniprot/O04862 O04862]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
+
{{#set: common name=3-dehydroquinate_synthase}}
−
** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
+
{{#set: ec number=EC-2.7.1.71}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=Tiso_gene_12435|Tiso_gene_3974}}
−
{{#set: common name=folic_acid_synthesis_protein}}
+
{{#set: in pathway=PWY-6163}}
−
{{#set: ec number=EC-2.7.6.3}}
+
−
{{#set: gene associated=Tiso_gene_11659}}
+
−
{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:26, 10 January 2018

Reaction SHIKIMATE-KINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-dehydroquinate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 shikimate[c] + 1 ATP[c] <=> 1 shikimate 3-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6661&oldid=12921"