Difference between revisions of "PWY-6722"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_4754 == * left end position: ** 5903 * transcription direction: ** POSITIVE * right end position: ** 7247 * centisome position: ** 41.10437...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosp...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** REVERSIBLE |
| − | * | + | * common name: |
| − | ** | + | ** ORF |
| − | + | ** phosphoserine_aminotransferase | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[GLT]][c] '''+''' 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c] |
| − | *** | + | * With common name(s): |
| − | ** | + | ** 1 L-glutamate[c] '''+''' 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c] |
| − | *** | + | |
| − | ** [[pantograph]]-[[ | + | == Genes associated with this reaction == |
| − | + | Genes have been associated with this reaction based on different elements listed below. | |
| − | ** [[pantograph]]-[[ | + | * [[Tiso_gene_17123]] |
| − | == Pathways | + | ** IN-SILICO_ANNOTATION |
| − | * [[ | + | ***EC-NUMBER |
| − | * [[ | + | ** EXPERIMENTAL_ANNOTATION |
| − | * [[ | + | ***EC-NUMBER |
| − | * [[ | + | ** [[pantograph]]-[[esiliculosus]] |
| − | * [[ | + | * [[Tiso_gene_15686]] |
| − | * [[ | + | ** IN-SILICO_ANNOTATION |
| − | * [[ | + | ***EC-NUMBER |
| − | * [[ | + | ** EXPERIMENTAL_ANNOTATION |
| + | ***EC-NUMBER | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[esiliculosus]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[experimental_annotation]] | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085] |
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: pathway | + | {{#set: common name=ORF}} |
| + | {{#set: common name=phosphoserine_aminotransferase}} | ||
| + | {{#set: ec number=EC-2.6.1.52}} | ||
| + | {{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}} | ||
| + | {{#set: in pathway=PYRIDOXSYN-PWY}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=esiliculosus}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} | ||
Revision as of 17:00, 10 January 2018
Contents
Reaction PSERTRANSAMPYR-RXN
- direction:
- REVERSIBLE
- common name:
- ORF
- phosphoserine_aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GLT[c] + 1 3OH-4P-OH-ALPHA-KETOBUTYRATE[c] <=> 1 2-KETOGLUTARATE[c] + 1 4-PHOSPHONOOXY-THREONINE[c]
- With common name(s):
- 1 L-glutamate[c] + 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] <=> 1 2-oxoglutarate[c] + 1 4-phospho-hydroxy-L-threonine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_17123
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
- Tiso_gene_15686
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
External links
