Difference between revisions of "PWY-6722"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-...")
(Created page with "Category:Gene == Gene Tiso_gene_8636 == * right end position: ** 10042 * transcription direction: ** POSITIVE * left end position: ** 4847 * centisome position: ** 48.2576...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
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== Gene Tiso_gene_8636 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** 10042
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* common name:
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* transcription direction:
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** reductive TCA cycle II
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** POSITIVE
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* left end position:
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** 4847
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* centisome position:
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** 48.257668   
 
* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
 
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** reductive tricarboxylic acid pathway
 
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** reductive citric acid cycle
 
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** reverse citric acid cycle
 
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** carbon fixation
 
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** CO2 fixation
 
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** reductive carboxylic acid cycle
 
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''5''' reactions found over '''12''' reactions in the full pathway
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* Reaction: [[RXN-15556]]
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* [[ACONITATEDEHYDR-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_13007]]
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* Reaction: [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** [[orthology-synechocystis]]
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* [[PWY-7511]]
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* [[ACONITATEHYDR-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13007]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_6720]]
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*** [[Tiso_gene_3691]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1990]]
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*** [[Tiso_gene_2323]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_15846]]
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*** [[Tiso_gene_11866]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-200783}}
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{{#set: right end position=10042}}
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{{#set: common name=reductive TCA cycle II}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: left end position=4847}}
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{{#set: reaction found=5}}
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{{#set: centisome position=48.257668    }}
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{{#set: total reaction=12}}
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: completion rate=42.0}}
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{{#set: pathway associated=PWY-7511}}

Revision as of 15:58, 21 March 2018

Gene Tiso_gene_8636

  • right end position:
    • 10042
  • transcription direction:
    • POSITIVE
  • left end position:
    • 4847
  • centisome position:
    • 48.257668
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6722&oldid=31501"