Difference between revisions of "PWY-6728"

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(Created page with "Category:Gene == Gene Tiso_gene_16538 == * left end position: ** 362 * transcription direction: ** POSITIVE * right end position: ** 3667 * centisome position: ** 8.424482...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_16538 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] ==
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* left end position:
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* taxonomic range:
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** 362
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-183963]
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* transcription direction:
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* common name:
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** POSITIVE
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** methylaspartate cycle
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* right end position:
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** 3667
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−
* centisome position:
+
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** 8.424482   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[2.4.2.31-RXN]]
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'''11''' reactions found over '''18''' reactions in the full pathway
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** in-silico_annotation
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* [[ACONITATEDEHYDR-RXN]]
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***ec-number
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** 1 associated gene(s):
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== Pathways associated ==
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*** [[Tiso_gene_13007]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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* [[ACONITATEHYDR-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13007]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[CITSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18030]]
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*** [[Tiso_gene_9601]]
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*** [[Tiso_gene_9603]]
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*** [[Tiso_gene_9602]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
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*** [[Tiso_gene_6720]]
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** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_2337]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ISOCITDEH-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
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*** [[Tiso_gene_10809]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_14377]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_9771]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[PROPIONYL-COA-CARBOXY-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_5029]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-AMMONIA-LYASE-RXN METHYLASPARTATE-AMMONIA-LYASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12168 RXN-12168]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=362}}
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{{#set: taxonomic range=TAX-183963}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=methylaspartate cycle}}
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{{#set: right end position=3667}}
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{{#set: reaction found=11}}
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{{#set: centisome position=8.424482    }}
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{{#set: total reaction=18}}
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{{#set: reaction associated=2.4.2.31-RXN}}
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{{#set: completion rate=61.0}}

Latest revision as of 20:04, 21 March 2018

Pathway PWY-6728

  • taxonomic range:
  • common name:
    • methylaspartate cycle
  • Synonym(s):

Reaction(s) found

11 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6728&oldid=39338"