Difference between revisions of "PWY-6797"

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(Created page with "Category:Gene == Gene Tiso_gene_5857 == * left end position: ** 56 * transcription direction: ** NEGATIVE * right end position: ** 2702 * centisome position: ** 0.43583158...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5857 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN] ==
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* left end position:
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* direction:
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** 56
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** sucrose-phosphate_synthase
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* right end position:
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* ec number:
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** 2702
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** [http://enzyme.expasy.org/EC/2.4.1.14 EC-2.4.1.14]
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* centisome position:
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** 0.43583158   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[athaliana]]
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** 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[SUCROSE-6P]][c] '''+''' 1 [[UDP]][c]
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** [[pantograph]]-[[creinhardtii]]
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* With common name(s):
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* [[HACD5]]
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** 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 H+[c] '''+''' 1 sucrose 6F-phosphate[c] '''+''' 1 UDP[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[HACD5m]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HBCHL]]
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* Gene: [[Tiso_gene_14247]]
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** [[pantograph]]-[[creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* [[HBCHLm]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[HBCO]]
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
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** [[pantograph]]-[[creinhardtii]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[HMNOS]]
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* [[PWY-7347]], sucrose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7347 PWY-7347]
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** [[pantograph]]-[[creinhardtii]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[METHYLACYLYLCOA-HYDROXY-RXN]]
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* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
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** [[pantograph]]-[[athaliana]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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** [[pantograph]]-[[esiliculosus]]
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== Reconstruction information  ==
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* [[OHACYL-COA-DEHYDROG-RXN]]
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* Category: [[annotation]]
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** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
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***ec-number
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*** Tool: [[pathwaytools]]
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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−
* [[PEROXID-RXN]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-10698]]
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** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-10702]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-10703]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-11245]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-11662]]
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−
** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-11667]]
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−
** [[pantograph]]-[[athaliana]]
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−
* [[RXN-12490]]
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** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-12507]]
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−
** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-12570]]
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** in-silico_annotation
+
−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-12705]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-12750]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14240]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14266]]
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** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-14271]]
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−
** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-14275]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-15288]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-16133]]
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** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17777]]
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** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
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−
* [[RXN-17781]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
+
−
***ec-number
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−
* [[RXN-17786]]
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−
** in-silico_annotation
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−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
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−
* [[RXN-17790]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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* [[RXN-17793]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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* [[RXN-17794]]
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** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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* [[RXN-17797]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-17798]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
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−
* [[RXN-2425]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-6383]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
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−
** [[pantograph]]-[[creinhardtii]]
+
−
** [[pantograph]]-[[creinhardtii]]
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−
* [[RXN-8635]]
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−
** [[pantograph]]-[[esiliculosus]]
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−
* [[RXN-905]]
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−
** in-silico_annotation
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−
***ec-number
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−
** experimental_annotation
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−
***ec-number
+
−
* [[RXN0-2044]]
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** in-silico_annotation
+
−
***ec-number
+
−
** experimental_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[TIGLYLCOA-HYDROXY-RXN]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways associated ==
+
−
* [[PWY-6920]]
+
−
* [[P162-PWY]]
+
−
* [[PWY-5177]]
+
−
* [[PWY-6583]]
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−
* [[VALDEG-PWY]]
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−
* [[PWY-6883]]
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−
* [[PWY-7656]]
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−
* [[PWY-5136]]
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−
* [[PWY-7778]]
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−
* [[PWY-7779]]
+
−
* [[PWY-7574]]
+
−
* [[PWY-7094]]
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−
* [[PWY-7654]]
+
−
* [[P3-PWY]]
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−
* [[PWY66-391]]
+
−
* [[PWY-5789]]
+
−
* [[PWY-5461]]
+
−
* [[FAO-PWY]]
+
−
* [[CENTFERM-PWY]]
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−
* [[PWY-6945]]
+
−
* [[PWY0-321]]
+
−
* [[PWY-5743]]
+
−
* [[ILEUDEG-PWY]]
+
−
* [[PWY-5744]]
+
−
* [[PWY-7007]]
+
−
* [[PWY-6435]]
+
−
* [[PWY-7214]]
+
−
* [[PWY-7216]]
+
−
* [[PWY-1361]]
+
−
* [[PWY-5109]]
+
−
* [[PWY-7445]]
+
−
* [[PWY-6946]]
+
−
* [[PWY-81]]
+
−
* [[PWY-6944]]
+
−
* [[PWY-735]]
+
−
* [[PWY-7401]]
+
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* [[PWY-6863]]
+
−
* [[PWY-3941]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=56}}
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* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22172 22172]
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{{#set: right end position=2702}}
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* LIGAND-RXN:
−
{{#set: centisome position=0.43583158    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00766 R00766]
−
{{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|HACD5|HACD5m|HBCHL|HBCHLm|HBCO|HMNOS|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12570|RXN-12705|RXN-12750|RXN-14240|RXN-14266|RXN-14271|RXN-14275|RXN-15288|RXN-16133|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-8635|RXN-905|RXN0-2044|TIGLYLCOA-HYDROXY-RXN}}
+
* PIR:
−
{{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-7656|PWY-5136|PWY-7778|PWY-7779|PWY-7574|PWY-7094|PWY-7654|P3-PWY|PWY66-391|PWY-5789|PWY-5461|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5743|ILEUDEG-PWY|PWY-5744|PWY-7007|PWY-6435|PWY-7214|PWY-7216|PWY-1361|PWY-5109|PWY-7445|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863|PWY-3941}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4783 JC4783]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JQ1329 JQ1329]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JQ2277 JQ2277]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S34172 S34172]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72648 S72648]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72649 S72649]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72650 S72650]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04103 T04103]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09833 T09833]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09837 T09837]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12195 T12195]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q43802 Q43802]
 +
** [http://www.uniprot.org/uniprot/P31927 P31927]
 +
** [http://www.uniprot.org/uniprot/P31928 P31928]
 +
** [http://www.uniprot.org/uniprot/Q43845 Q43845]
 +
** [http://www.uniprot.org/uniprot/O22060 O22060]
 +
** [http://www.uniprot.org/uniprot/O22081 O22081]
 +
** [http://www.uniprot.org/uniprot/O22096 O22096]
 +
** [http://www.uniprot.org/uniprot/Q43010 Q43010]
 +
** [http://www.uniprot.org/uniprot/O04932 O04932]
 +
** [http://www.uniprot.org/uniprot/O04933 O04933]
 +
** [http://www.uniprot.org/uniprot/Q43876 Q43876]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=sucrose-phosphate_synthase}}
 +
{{#set: ec number=EC-2.4.1.14}}
 +
{{#set: gene associated=Tiso_gene_14247}}
 +
{{#set: in pathway=PWY-7238|PWY-7347|SUCSYN-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 15:52, 21 March 2018

Reaction SUCROSE-PHOSPHATE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sucrose-phosphate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-fructofuranose 6-phosphate[c] + 1 UDP-α-D-glucose[c] => 1 H+[c] + 1 sucrose 6F-phosphate[c] + 1 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7347, sucrose biosynthesis III: PWY-7347
    • 2 reactions found over 3 reactions in the full pathway
  • SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6797&oldid=30844"