Difference between revisions of "PWY-6886"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] ** [ht...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 
* common name:
 
* common name:
−
** putrescine biosynthesis III
+
** 1-butanol autotrophic biosynthesis (engineered)
 
* Synonym(s):
 
* Synonym(s):
−
** ODC pathway
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''1''' reaction(s) found
+
'''8''' reactions found over '''11''' reactions in the full pathway
−
** [[ORNDECARBOX-RXN]]
+
* [[2PGADEHYDRAT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_8720]]
 +
*** [[Tiso_gene_14718]]
 +
*** [[Tiso_gene_5619]]
 +
*** [[Tiso_gene_13317]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[3PGAREARR-RXN]]
 +
** 16 associated gene(s):
 +
*** [[Tiso_gene_15048]]
 +
*** [[Tiso_gene_7201]]
 +
*** [[Tiso_gene_9922]]
 +
*** [[Tiso_gene_2841]]
 +
*** [[Tiso_gene_14530]]
 +
*** [[Tiso_gene_16754]]
 +
*** [[Tiso_gene_2365]]
 +
*** [[Tiso_gene_16271]]
 +
*** [[Tiso_gene_5468]]
 +
*** [[Tiso_gene_20311]]
 +
*** [[Tiso_gene_14664]]
 +
*** [[Tiso_gene_15391]]
 +
*** [[Tiso_gene_14212]]
 +
*** [[Tiso_gene_10516]]
 +
*** [[Tiso_gene_9923]]
 +
*** [[Tiso_gene_2667]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CALVIN-PWY]]
 +
** 0 associated gene:
 +
* [[PEPDEPHOS-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
 +
*** [[Tiso_gene_14504]]
 +
*** [[Tiso_gene_974]]
 +
*** [[Tiso_gene_14505]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_3526]]
 +
*** [[Tiso_gene_18264]]
 +
*** [[Tiso_gene_3527]]
 +
*** [[Tiso_gene_18263]]
 +
*** [[Tiso_gene_12104]]
 +
*** [[Tiso_gene_14642]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PWY-101]]
 +
** 0 associated gene:
 +
* [[PWY-6883]]
 +
** 0 associated gene:
 +
* [[PYRUVDEH-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_2515]]
 +
*** [[Tiso_gene_6983]]
 +
*** [[Tiso_gene_17539]]
 +
*** [[Tiso_gene_2693]]
 +
*** [[Tiso_gene_9330]]
 +
*** [[Tiso_gene_7519]]
 +
*** [[Tiso_gene_19780]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''0''' reaction(s) not found
 
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: taxonomic range=TAX-186801}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-46 PWY-46]
+
{{#set: taxonomic range=TAX-33682}}
−
* ARACYC:
+
{{#set: taxonomic range=TAX-1117}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-46 PWY-46]
+
{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: reaction found=8}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: total reaction=11}}
−
{{#set: common name=putrescine biosynthesis III}}
+
{{#set: completion rate=73.0}}
−
{{#set: common name=ODC pathway}}
+
−
{{#set: reaction found=1}}
+
−
{{#set: reaction not found=0}}
+

Latest revision as of 20:25, 21 March 2018

Pathway PWY-6886

Reaction(s) found

8 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6886&oldid=41516"