Difference between revisions of "PWY-7111"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase ** ORF * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** polyketide_synthase
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** pyruvate fermentation to isobutanol (engineered)
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* Synonym(s):
 
* Synonym(s):
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** isobutanol biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''5''' reactions in the full pathway
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** 1 [[NAD]][c] '''+''' 1 [[CPD-7032]][c] '''<=>''' 1 [[CPD-7031]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* [[ACETOLACTREDUCTOISOM-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 NAD+[c] '''+''' 1 3-methylbutanol[c] '''<=>''' 1 3-methylbutanal[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_10173]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_5424]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[ACETOLACTSYN-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Tiso_gene_5425]]
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*** [[Tiso_gene_11362]]
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[manual-primary_network]]
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* [[Tiso_gene_6563]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Tiso_gene_6562]]
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*** [[Tiso_gene_1563]]
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** IN-SILICO_ANNOTATION
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** 4 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_7649]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[RXN-7657]]
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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** 5 associated gene(s):
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[Tiso_gene_6562]]
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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*** [[Tiso_gene_5425]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_7649]]
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== Reconstruction information  ==
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*** [[Tiso_gene_6563]]
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* Category: [[annotation]]
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*** [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7643 RXN-7643]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05685 R05685]
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{{#set: taxonomic range=TAX-2759}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=pyruvate fermentation to isobutanol (engineered)}}
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{{#set: common name=ORF}}
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{{#set: common name=isobutanol biosynthesis}}
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{{#set: ec number=EC-1.1.1.1}}
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{{#set: reaction found=4}}
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{{#set: gene associated=Tiso_gene_5424|Tiso_gene_5425|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_7649}}
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{{#set: total reaction=5}}
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{{#set: in pathway=PWY-5076|PWY-6871}}
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{{#set: completion rate=80.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Pathway PWY-7111

  • taxonomic range:
  • common name:
    • pyruvate fermentation to isobutanol (engineered)
  • Synonym(s):
    • isobutanol biosynthesis

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7111&oldid=41283"