Difference between revisions of "PWY-7153"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase * ec numbe...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4070 TAX-40...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4070 TAX-4070]
 
* common name:
 
* common name:
** polyketide_synthase
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** nicotine biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''9''' reactions in the full pathway
** 1 [[CPD-13533]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-13534]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
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* [[L-ASPARTATE-OXID-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 (R)-3-hydroxyvaleryl-CoA[c] '''+''' 1 NADP+[c] '''<=>''' 1 &beta;-ketovaleryl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_7285]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[QUINOPRIBOTRANS-RXN]]
* [[Tiso_gene_500]]
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** 4 associated gene(s):
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_141]]
***EC-NUMBER
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*** [[Tiso_gene_12892]]
* [[Tiso_gene_6562]]
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*** [[Tiso_gene_8723]]
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_140]]
***EC-NUMBER
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** 5 reconstruction source(s) associated:
* [[Tiso_gene_13394]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-athaliana]]
***EC-NUMBER
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*** [[orthology-creinhardtii]]
* [[Tiso_gene_135]]
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*** [[orthology-synechocystis]]
** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
***EC-NUMBER
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== Reaction(s) not found ==
* [[Tiso_gene_5424]]
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* [http://metacyc.org/META/NEW-IMAGE?object=QUINOLINATE-SYNTHA-RXN QUINOLINATE-SYNTHA-RXN]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13057 RXN-13057]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13058 RXN-13058]
* [[Tiso_gene_10876]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13059 RXN-13059]
** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13060 RXN-13060]
***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8248 RXN-8248]
* [[Tiso_gene_6563]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8444 RXN-8444]
** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-4070}}
{{#set: common name=polyketide_synthase}}
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{{#set: common name=nicotine biosynthesis}}
{{#set: ec number=EC-1.1.1.36}}
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{{#set: reaction found=2}}
{{#set: gene associated=Tiso_gene_500|Tiso_gene_6562|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_5424|Tiso_gene_10876|Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_136}}
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{{#set: total reaction=9}}
{{#set: in pathway=}}
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{{#set: completion rate=22.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:29, 21 March 2018

Pathway PWY-5316

  • taxonomic range:
  • common name:
    • nicotine biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links