Difference between revisions of "PWY-7218"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_12219 == * left end position: ** 2669 * transcription direction: ** POSITIVE * right end position: ** 7174 * centisome position: ** 37.0026...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] ==
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== Gene Tiso_gene_12219 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2669
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
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** POSITIVE
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* right end position:
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** 7174
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* centisome position:
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** 37.002636   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[6.3.5.6-RXN]]
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** 1 [[CPD-6994]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c] '''+''' 1 [[SUC]][c]
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** experimental_annotation
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* With common name(s):
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***automated-name-match
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** 1 (2S)-eriodictyol[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 CO2[c] '''+''' 1 (+)-taxifolin[c] '''+''' 1 succinate[c]
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* [[6.3.5.7-RXN]]
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** experimental_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_3330]]
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* [[PWY490-4]]
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** [[pantograph]]-[[athaliana]]
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* [[PWY-5921]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''5''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=2669}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7174}}
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{{#set: ec number=EC-1.14.11.9}}
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{{#set: centisome position=37.002636    }}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: reaction associated=6.3.5.6-RXN|6.3.5.7-RXN}}
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{{#set: in pathway=PWY1F-823|PWY-6787}}
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{{#set: pathway associated=PWY490-4|PWY-5921}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 19:06, 18 March 2018

Gene Tiso_gene_12219

  • left end position:
    • 2669
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7174
  • centisome position:
    • 37.002636
  • Synonym(s):

Reactions associated

  • 6.3.5.6-RXN
    • experimental_annotation
      • automated-name-match
  • 6.3.5.7-RXN
    • experimental_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7218&oldid=21922"