Difference between revisions of "PWY-7218"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10915 RXN-10915] == * direction: ** REVERSIBLE * common name: ** 3,4-dihydroxyphenylglycol dehy...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10915 RXN-10915] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 3,4-dihydroxyphenylglycol dehydrogenase
+
** photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
−
** polyketide_synthase
+
−
** ORF
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** photosynthetic 3-hydroxybutyrate biosynthesis (engineered)
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''7''' reactions found over '''10''' reactions in the full pathway
−
** 1 [[CPD-11497]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11876]][c]
+
* [[2PGADEHYDRAT-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 1 3-methoxy-4-hydroxyphenylglycol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-methoxy-4-hydroxyphenylglycolaldehyde[c]
+
*** [[Tiso_gene_8720]]
−
 
+
*** [[Tiso_gene_14718]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_5619]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_13317]]
−
* [[Tiso_gene_6563]]
+
** 7 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_5425]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-athaliana]]
−
***EC-NUMBER
+
*** [[orthology-synechocystis]]
−
* [[Tiso_gene_6562]]
+
*** [[manual-primary_network]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* [[3PGAREARR-RXN]]
−
* [[Tiso_gene_5424]]
+
** 16 associated gene(s):
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_15048]]
−
***EC-NUMBER
+
*** [[Tiso_gene_7201]]
−
* [[Tiso_gene_7649]]
+
*** [[Tiso_gene_9922]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_2841]]
−
***EC-NUMBER
+
*** [[Tiso_gene_14530]]
−
== Pathways  ==
+
*** [[Tiso_gene_16754]]
−
* [[PWY-6342]], noradrenaline and adrenaline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342]
+
*** [[Tiso_gene_2365]]
−
** '''2''' reactions found over '''13''' reactions in the full pathway
+
*** [[Tiso_gene_16271]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_5468]]
−
* [[annotation]]:
+
*** [[Tiso_gene_20311]]
−
** [[pathwaytools]]:
+
*** [[Tiso_gene_14664]]
−
*** [[in-silico_annotation]]
+
*** [[Tiso_gene_15391]]
 +
*** [[Tiso_gene_14212]]
 +
*** [[Tiso_gene_10516]]
 +
*** [[Tiso_gene_9923]]
 +
*** [[Tiso_gene_2667]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CALVIN-PWY]]
 +
** 0 associated gene:
 +
* [[PEPDEPHOS-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
 +
*** [[Tiso_gene_14504]]
 +
*** [[Tiso_gene_974]]
 +
*** [[Tiso_gene_14505]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PWY-101]]
 +
** 0 associated gene:
 +
* [[PWY-7216]]
 +
** 0 associated gene:
 +
* [[PYRUVDEH-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_2515]]
 +
*** [[Tiso_gene_6983]]
 +
*** [[Tiso_gene_17539]]
 +
*** [[Tiso_gene_2693]]
 +
*** [[Tiso_gene_9330]]
 +
*** [[Tiso_gene_7519]]
 +
*** [[Tiso_gene_19780]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=3,4-dihydroxyphenylglycol dehydrogenase}}
+
{{#set: common name=photosynthetic 3-hydroxybutanoate biosynthesis (engineered)}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=photosynthetic 3-hydroxybutyrate biosynthesis (engineered)}}
−
{{#set: common name=ORF}}
+
{{#set: reaction found=7}}
−
{{#set: ec number=EC-1.1.1.1}}
+
{{#set: total reaction=10}}
−
{{#set: gene associated=Tiso_gene_6563|Tiso_gene_5425|Tiso_gene_6562|Tiso_gene_5424|Tiso_gene_7649}}
+
{{#set: completion rate=70.0}}
−
{{#set: in pathway=PWY-6342}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:20, 21 March 2018

Pathway PWY-7218

  • taxonomic range:
  • common name:
    • photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
  • Synonym(s):
    • photosynthetic 3-hydroxybutyrate biosynthesis (engineered)

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7218&oldid=40974"