Difference between revisions of "PWY-735"

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(Created page with "Category:Gene == Gene Tiso_gene_2889 == * left end position: ** 5022 * transcription direction: ** NEGATIVE * right end position: ** 8172 * centisome position: ** 27.82425...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_2889 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] ==
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* left end position:
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* taxonomic range:
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** 5022
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* transcription direction:
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* common name:
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** NEGATIVE
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** jasmonic acid biosynthesis
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* right end position:
+
−
** 8172
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−
* centisome position:
+
−
** 27.824255   
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* Synonym(s):
 
* Synonym(s):
 +
** jasmonate biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[ATPASE-RXN]]
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'''15''' reactions found over '''19''' reactions in the full pathway
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** in-silico_annotation
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* [[RXN-10695]]
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***ec-number
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** 2 associated gene(s):
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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*** [[Tiso_gene_14183]]
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** in-silico_annotation
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*** [[Tiso_gene_12275]]
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***ec-number
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** 1 reconstruction source(s) associated:
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* [[RXN-12195]]
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*** [[orthology-esiliculosus]]
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** in-silico_annotation
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* [[RXN-10696]]
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***ec-number
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** 1 associated gene(s):
−
* [[RXN-12196]]
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*** [[Tiso_gene_18566]]
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** in-silico_annotation
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** 2 reconstruction source(s) associated:
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***ec-number
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*** [[annotation-in-silico_annotation]]
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* [[RXN0-5462]]
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*** [[orthology-esiliculosus]]
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** in-silico_annotation
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* [[RXN-10697]]
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***ec-number
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** 3 associated gene(s):
−
== Pathways associated ==
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*** [[Tiso_gene_16145]]
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* [[PWY-7184]]
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*** [[Tiso_gene_14262]]
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* [[PWY-7198]]
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*** [[Tiso_gene_6885]]
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* [[PWY-6545]]
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** 1 reconstruction source(s) associated:
−
* [[PWY-7210]]
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*** [[orthology-esiliculosus]]
 +
* [[RXN-10698]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_18838]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10699]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_3856]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10700]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10701]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
*** [[Tiso_gene_15327]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10702]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14262]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10703]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10704]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_14262]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10705]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10706]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10707]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10708]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_10984]]
 +
*** [[Tiso_gene_801]]
 +
*** [[Tiso_gene_7477]]
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*** [[Tiso_gene_800]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-1321]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_4463]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=12-OXOPHYTODIENOATE-REDUCTASE-RXN 12-OXOPHYTODIENOATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ALLENE-OXIDE-CYCLASE-RXN ALLENE-OXIDE-CYCLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-745 RXN-745]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-19 RXN1F-19]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=5022}}
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* ARACYC:
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{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-735 PWY-735]
−
{{#set: right end position=8172}}
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{{#set: taxonomic range=TAX-33090}}
−
{{#set: centisome position=27.824255    }}
+
{{#set: common name=jasmonic acid biosynthesis}}
−
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: common name=jasmonate biosynthesis}}
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
{{#set: reaction found=15}}
 +
{{#set: total reaction=19}}
 +
{{#set: completion rate=79.0}}

Latest revision as of 20:37, 21 March 2018

Pathway PWY-735

  • taxonomic range:
  • common name:
    • jasmonic acid biosynthesis
  • Synonym(s):
    • jasmonate biosynthesis

Reaction(s) found

15 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-735&oldid=42833"