Difference between revisions of "PWY-735"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13707 RXN-13707] == * direction: ** LEFT-TO-RIGHT * common name: ** 24,25-dihydrolanosterol 14-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13707 RXN-13707] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** 24,25-dihydrolanosterol 14-demethylase
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** jasmonic acid biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.13.70 EC-1.14.13.70]
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* Synonym(s):
 
* Synonym(s):
 +
** jasmonate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''15''' reactions found over '''19''' reactions in the full pathway
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** 3 [[NADPH]][c] '''+''' 1 [[CPD-8606]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-8609]][c] '''+''' 1 [[FORMATE]][c] '''+''' 3 [[NADP]][c] '''+''' 4 [[WATER]][c]
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* [[RXN-10695]]
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* With common name(s):
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** 2 associated gene(s):
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** 3 NADPH[c] '''+''' 1 24,25-dihydrolanosterol[c] '''+''' 2 H+[c] '''+''' 3 oxygen[c] '''=>''' 1 4,4-dimethyl-5-α-cholesta-8,14-dien-3-β-ol[c] '''+''' 1 formate[c] '''+''' 3 NADP+[c] '''+''' 4 H2O[c]
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*** [[Tiso_gene_14183]]
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*** [[Tiso_gene_12275]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_8263]]
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* [[RXN-10696]]
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** [[pantograph]]-[[esiliculosus]]
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Tiso_gene_18566]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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* [[RXN-10697]]
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** 3 associated gene(s):
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*** [[Tiso_gene_16145]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_6885]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[RXN-10698]]
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** 6 associated gene(s):
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_18838]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10699]]
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** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
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*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_3856]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10700]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10701]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_10116]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_3856]]
 +
*** [[Tiso_gene_15327]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-10702]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14262]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10703]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_18839]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_14026]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10704]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_14262]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10705]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_16145]]
 +
*** [[Tiso_gene_6885]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10706]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10707]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-10708]]
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** 4 associated gene(s):
 +
*** [[Tiso_gene_10984]]
 +
*** [[Tiso_gene_801]]
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*** [[Tiso_gene_7477]]
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*** [[Tiso_gene_800]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN-1321]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_4463]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=12-OXOPHYTODIENOATE-REDUCTASE-RXN 12-OXOPHYTODIENOATE-REDUCTASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ALLENE-OXIDE-CYCLASE-RXN ALLENE-OXIDE-CYCLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-745 RXN-745]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-19 RXN1F-19]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=24,25-dihydrolanosterol 14-demethylase}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-735 PWY-735]
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{{#set: ec number=EC-1.14.13.70}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: gene associated=Tiso_gene_8263}}
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{{#set: common name=jasmonic acid biosynthesis}}
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{{#set: in pathway=}}
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{{#set: common name=jasmonate biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=15}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=19}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: completion rate=79.0}}

Latest revision as of 20:37, 21 March 2018

Pathway PWY-735

  • taxonomic range:
  • common name:
    • jasmonic acid biosynthesis
  • Synonym(s):
    • jasmonate biosynthesis

Reaction(s) found

15 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-735&oldid=42833"