Difference between revisions of "PWY-7400"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-236 RXN1G-236] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta13-3-oxo-C32:1-[ac...")
(Created page with "Category:Gene == Gene Tiso_gene_13682 == * left end position: ** 26 * transcription direction: ** POSITIVE * right end position: ** 2763 * centisome position: ** 0.4233149...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-236 RXN1G-236] ==
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== Gene Tiso_gene_13682 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 26
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* common name:
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* transcription direction:
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** cis-delta13-3-oxo-C32:1-[acyl-carrier protein] synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
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** 2763
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* centisome position:
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** 0.4233149   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[AMIDASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[cis-delta11-melissoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[cis-delta13-3-oxo-lacceroyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 H+[c] '''+''' 1 a cis-delta11-C30:1-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a cis-delta13-3-oxo-C32:1-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_19302]]
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* [[PYRAZIN-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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* [[Tiso_gene_15991]]
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* [[R311-RXN]]
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* [[Tiso_gene_14485]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***automated-name-match
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== Pathways ==
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* [[RXN-14727]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** in-silico_annotation
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** '''86''' reactions found over '''182''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-14728]]
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* [[orthology]]:
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** in-silico_annotation
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** [[pantograph]]:
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***automated-name-match
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*** [[esiliculosus]]
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* [[RXN-17608]]
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** in-silico_annotation
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***automated-name-match
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* [[RXNN-404]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[PWY-581]]
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* [[PWY-5025]]
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* [[PWY-3161]]
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* [[ARGDEG-V-PWY]]
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* [[PWY-7308]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=26}}
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{{#set: common name=cis-delta13-3-oxo-C32:1-[acyl-carrier protein] synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.3.1.M1}}
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{{#set: right end position=2763}}
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{{#set: gene associated=Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_14485}}
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{{#set: centisome position=0.4233149    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 19:03, 18 March 2018

Gene Tiso_gene_13682

  • left end position:
    • 26
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2763
  • centisome position:
    • 0.4233149
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7400&oldid=21591"