Difference between revisions of "PWY-7426"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.3-RXN 1.3.7.3-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
−
** [http://enzyme.expasy.org/EC/1.3.7.3 EC-1.3.7.3]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
* common name:
 +
** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
 
* Synonym(s):
 
* Synonym(s):
 +
** HMP-PP biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
−
** 2 [[PROTON]][c] '''+''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[3Z-PHYCOERYTHROBILIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* [[PYRIMSYN3-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 2 H+[c] '''+''' 1 15,16-dihydrobiliverdin[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 (3Z)-phycoerythrobilin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
*** [[Tiso_gene_2159]]
−
 
+
*** [[Tiso_gene_2160]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_16224]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_17192]]
−
* [[Tiso_gene_17350]]
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-athaliana]]
−
== Pathways  ==
+
*** [[annotation-in-silico_annotation]]
−
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
+
*** [[orthology-esiliculosus]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
== Reaction(s) not found ==
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN1-RXN PYRIMSYN1-RXN]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ECOCYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05819 R05819]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6890 PWY-6890]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: ec number=EC-1.3.7.3}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: gene associated=Tiso_gene_17350}}
+
{{#set: taxonomic range=TAX-33630}}
−
{{#set: in pathway=PWY-5915|PWY-7579}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: common name=HMP-PP biosynthesis}}
 +
{{#set: reaction found=1}}
 +
{{#set: total reaction=2}}
 +
{{#set: completion rate=50.0}}

Revision as of 19:25, 18 March 2018

Pathway PWY-6890

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7426&oldid=24214"