Difference between revisions of "PWY-7490"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] == * direction: ** LEFT-TO-RIGHT * common name: ** coproporphyrinogen-iii_oxid...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Peptide-3-hydroxy-L-Aspartates Peptide-3-hydroxy-L-Aspartates] == * common name: ** a [protein]...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Peptide-3-hydroxy-L-Aspartates Peptide-3-hydroxy-L-Aspartates] ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
−
** coproporphyrinogen-iii_oxidase
+
** a [protein]-3-hydroxy-L-aspartate
−
** coproporphyrinogen_iii_oxidase_chloroplast
+
−
** coproporphyrinogen_oxidase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.3.3 EC-1.3.3.3]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** a peptide 3-hydroxy-L-aspartate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c]
+
* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 oxygen[c] '''+''' 1 coproporphyrinogen III[c] '''+''' 2 H+[c] '''=>''' 2 CO2[c] '''+''' 2 H2O[c] '''+''' 1 protoporphyrinogen IX[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_2247]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_2246]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13364]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13365]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3671]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
== Pathways  ==
+
−
* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
−
* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-athaliana]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-synechocystis]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=a [protein]-3-hydroxy-L-aspartate}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257]
+
{{#set: common name=a peptide 3-hydroxy-L-aspartate}}
−
* LIGAND-RXN:
+
{{#set: produced by=PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03220 R03220]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9RLE1 Q9RLE1]
+
−
** [http://www.uniprot.org/uniprot/P36552 P36552]
+
−
** [http://www.uniprot.org/uniprot/O25376 O25376]
+
−
** [http://www.uniprot.org/uniprot/P36553 P36553]
+
−
** [http://www.uniprot.org/uniprot/P33771 P33771]
+
−
** [http://www.uniprot.org/uniprot/P43899 P43899]
+
−
** [http://www.uniprot.org/uniprot/O25824 O25824]
+
−
** [http://www.uniprot.org/uniprot/P54304 P54304]
+
−
** [http://www.uniprot.org/uniprot/P11353 P11353]
+
−
** [http://www.uniprot.org/uniprot/Q8X8G8 Q8X8G8]
+
−
** [http://www.uniprot.org/uniprot/Q9ZC86 Q9ZC86]
+
−
** [http://www.uniprot.org/uniprot/P36551 P36551]
+
−
** [http://www.uniprot.org/uniprot/P35055 P35055]
+
−
** [http://www.uniprot.org/uniprot/P43898 P43898]
+
−
** [http://www.uniprot.org/uniprot/P72848 P72848]
+
−
** [http://www.uniprot.org/uniprot/P73245 P73245]
+
−
** [http://www.uniprot.org/uniprot/P74132 P74132]
+
−
** [http://www.uniprot.org/uniprot/Q51676 Q51676]
+
−
** [http://www.uniprot.org/uniprot/Q42946 Q42946]
+
−
** [http://www.uniprot.org/uniprot/Q42840 Q42840]
+
−
** [http://www.uniprot.org/uniprot/Q39581 Q39581]
+
−
** [http://www.uniprot.org/uniprot/P95651 P95651]
+
−
** [http://www.uniprot.org/uniprot/Q9RFG1 Q9RFG1]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=coproporphyrinogen-iii_oxidase}}
+
−
{{#set: common name=coproporphyrinogen_iii_oxidase_chloroplast}}
+
−
{{#set: common name=coproporphyrinogen_oxidase}}
+
−
{{#set: ec number=EC-1.3.3.3}}
+
−
{{#set: gene associated=Tiso_gene_2247|Tiso_gene_2246|Tiso_gene_13364|Tiso_gene_13365|Tiso_gene_3671}}
+
−
{{#set: in pathway=PWY0-1415|HEME-BIOSYNTHESIS-II|CHLOROPHYLL-SYN|PWY-7159}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:04, 21 March 2018

Metabolite Peptide-3-hydroxy-L-Aspartates

  • common name:
    • a [protein]-3-hydroxy-L-aspartate
  • Synonym(s):
    • a peptide 3-hydroxy-L-aspartate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"a [protein]-3-hydroxy-L-aspartate" cannot be used as a page name in this wiki.


Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7490&oldid=32238"