Difference between revisions of "PWY-7803"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8014 RXN-8014] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8014 RXN-8014] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7840 PWY-7840] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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** gala-series glycosphingolipids biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** ganglioside GM4 biosynthesis
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** galaglycosphingolipids biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''5''' reactions in the full pathway
** 1 [[SINAPALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[SINAPATE]][c] '''+''' 1 [[NADPH]][c]
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* [[RXN-18301]]
* With common name(s):
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** 1 associated gene(s):
** 1 sinapaldehyde[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 sinapate[c] '''+''' 1 NADPH[c]
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*** [[Tiso_gene_13030]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-18302]]
* [[Tiso_gene_3513]]
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** 3 associated gene(s):
** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_11479]]
== Pathways  ==
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*** [[Tiso_gene_106]]
* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
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*** [[Tiso_gene_2142]]
** '''2''' reactions found over '''4''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
* [[orthology]]:
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*** [[annotation-experimental_annotation]]
** [[pantograph]]:
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* [[RXN-18303]]
*** [[athaliana]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_13030]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.47-RXN 2.4.1.47-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18291 RXN-18291]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
** [http://www.genome.jp/dbget-bin/www_bget?R07442 R07442]
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{{#set: common name=gala-series glycosphingolipids biosynthesis}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ganglioside GM4 biosynthesis|galaglycosphingolipids biosynthesis}}
{{#set: ec number=EC-1.2.1}}
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{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_3513}}
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{{#set: total reaction=5}}
{{#set: in pathway=PWY-5168}}
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{{#set: completion rate=60.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Revision as of 19:20, 18 March 2018

Pathway PWY-7840

  • taxonomic range:
  • common name:
    • gala-series glycosphingolipids biosynthesis
  • Synonym(s):
    • ganglioside GM4 biosynthesis
    • galaglycosphingolipids biosynthesis

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links