Difference between revisions of "PWY-7805"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
+
** aminomethylphosphonate degradation
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''8''' reactions in the full pathway
** 1 [[DELTA-TOCOPHEROL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[BETA-TOCOPHEROL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* [[INORGPYROPHOSPHAT-RXN]]
* With common name(s):
+
** 12 associated gene(s):
** 1 δ-tocopherol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 β-tocopherol[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
+
*** [[Tiso_gene_2850]]
 
+
*** [[Tiso_gene_6277]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_15874]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_16197]]
* [[Tiso_gene_6738]]
+
*** [[Tiso_gene_2851]]
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_17878]]
** [[pantograph]]-[[synechocystis]]
+
*** [[Tiso_gene_16375]]
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_9490]]
== Pathways  ==
+
*** [[Tiso_gene_17879]]
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
+
*** [[Tiso_gene_7014]]
** '''5''' reactions found over '''7''' reactions in the full pathway
+
*** [[Tiso_gene_17889]]
== Reconstruction information  ==
+
*** [[Tiso_gene_1110]]
* [[orthology]]:
+
** 7 reconstruction source(s) associated:
** [[pantograph]]:
+
*** [[annotation-experimental_annotation]]
*** [[creinhardtii]]
+
*** [[orthology-esiliculosus]]
*** [[synechocystis]]
+
*** [[annotation-in-silico_annotation]]
*** [[athaliana]]
+
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN0-1401]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_1011]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ADENPRIBOSYLTRAN-RXN ADENPRIBOSYLTRAN-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17954 RXN-17954]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17955 RXN-17955]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17956 RXN-17956]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6710 RXN0-6710]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7014 RXN0-7014]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* ECOCYC:
** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7805 PWY-7805]
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: ec number=EC-2.1.1.95}}
+
{{#set: common name=aminomethylphosphonate degradation}}
{{#set: gene associated=Tiso_gene_6738}}
+
{{#set: reaction found=2}}
{{#set: in pathway=PWY-1422}}
+
{{#set: total reaction=8}}
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=25.0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana}}
+

Latest revision as of 20:38, 21 March 2018

Pathway PWY-7805

  • taxonomic range:
  • common name:
    • aminomethylphosphonate degradation
  • Synonym(s):

Reaction(s) found

2 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links