Difference between revisions of "PWY0-1335"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutamate-1...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1335 PWY0-1335] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GSAAMINOTRANS-RXN GSAAMINOTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1335 PWY0-1335] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** glutamate-1-semialdehyde_-aminomutase_chloroplastic
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** NADH to cytochrome bo oxidase electron transfer I
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.3.8 EC-5.4.3.8]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''2''' reactions in the full pathway
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** 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
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* [[NADH-DEHYDROG-A-RXN]]
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* With common name(s):
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** 18 associated gene(s):
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** 1 (S)-4-amino-5-oxopentanoate[c] '''=>''' 1 5-aminolevulinate[c]
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*** [[Tiso_gene_13075]]
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*** [[Tiso_gene_4836]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5171]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_359]]
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* [[Tiso_gene_8141]]
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*** [[Tiso_gene_15276]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10326]]
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***EC-NUMBER
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*** [[Tiso_gene_18831]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_4894]]
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***EC-NUMBER
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*** [[Tiso_gene_9874]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_18172]]
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** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_18339]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_19691]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_2949]]
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== Pathways  ==
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*** [[Tiso_gene_17199]]
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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*** [[Tiso_gene_18707]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[Tiso_gene_3113]]
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== Reconstruction information  ==
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*** [[Tiso_gene_355]]
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* [[orthology]]:
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*** [[Tiso_gene_358]]
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** [[pantograph]]:
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** 4 reconstruction source(s) associated:
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*** [[creinhardtii]]
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*** [[annotation-experimental_annotation]]
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*** [[synechocystis]]
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*** [[manual-primary_network]]
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*** [[athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[manual]]:
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== Reaction(s) not found ==
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** [[primary_network]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5268 RXN0-5268]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1335 PWY0-1335]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
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{{#set: common name=NADH to cytochrome bo oxidase electron transfer I}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P18492 P18492]
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{{#set: total reaction=2}}
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** [http://www.uniprot.org/uniprot/P21267 P21267]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q06741 Q06741]
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** [http://www.uniprot.org/uniprot/Q06774 Q06774]
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** [http://www.uniprot.org/uniprot/P23893 P23893]
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** [http://www.uniprot.org/uniprot/O26330 O26330]
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** [http://www.uniprot.org/uniprot/P30949 P30949]
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** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
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** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
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** [http://www.uniprot.org/uniprot/O29027 O29027]
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** [http://www.uniprot.org/uniprot/P45621 P45621]
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** [http://www.uniprot.org/uniprot/P24630 P24630]
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** [http://www.uniprot.org/uniprot/P31593 P31593]
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** [http://www.uniprot.org/uniprot/Q39566 Q39566]
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** [http://www.uniprot.org/uniprot/P48247 P48247]
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** [http://www.uniprot.org/uniprot/P46716 P46716]
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** [http://www.uniprot.org/uniprot/Q40147 Q40147]
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** [http://www.uniprot.org/uniprot/O74061 O74061]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutamate-1-semialdehyde_-aminomutase_chloroplastic}}
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{{#set: ec number=EC-5.4.3.8}}
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{{#set: gene associated=Tiso_gene_8141}}
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{{#set: in pathway=PWY-5188}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:42, 21 March 2018

Pathway PWY0-1335

  • taxonomic range:
  • common name:
    • NADH to cytochrome bo oxidase electron transfer I
  • Synonym(s):

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY0-1335&oldid=43360"