Difference between revisions of "PWY1F-353"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol 24C methyltransferas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
** sterol 24C methyltransferase
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** C4 photosynthetic carbon assimilation cycle, NADP-ME type
 
* Synonym(s):
 
* Synonym(s):
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** PCA cycle
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** C4 photosynthesis, NADP-ME type
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''5''' reactions in the full pathway
** 1.0 [[CPD-12159]][c] '''+''' 1.0 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1.0 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1.0 [[CPD-12160]][c]
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* [[MALIC-NADP-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1.0 26,27-dehydrozymosterol[c] '''+''' 1.0 S-adenosyl-L-methionine[c] '''=>''' 1.0 S-adenosyl-L-homocysteine[c] '''+''' 1.0 24-alkyl sterol 1[c]
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*** [[Tiso_gene_12200]]
 
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*** [[Tiso_gene_6675]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_12896]]
Genes have been associated with this reaction based on different elements listed below.
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** 3 reconstruction source(s) associated:
* [[Tiso_gene_10757]]
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*** [[orthology-athaliana]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
* [[Tiso_gene_11071]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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* [[RXN0-5224]]
* [[Tiso_gene_14051]]
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** 10 associated gene(s):
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_18927]]
* [[Tiso_gene_19883]]
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*** [[Tiso_gene_6150]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_1600]]
* [[Tiso_gene_3977]]
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*** [[Tiso_gene_3056]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_9852]]
* [[Tiso_gene_8895]]
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*** [[Tiso_gene_17511]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_19413]]
* [[Tiso_gene_13974]]
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*** [[Tiso_gene_20230]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_19414]]
* [[Tiso_gene_15903]]
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*** [[Tiso_gene_7660]]
** [[pantograph]]-[[esiliculosus]]
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** 4 reconstruction source(s) associated:
* [[Tiso_gene_13588]]
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
* [[Tiso_gene_8634]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
* [[Tiso_gene_10659]]
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== Reaction(s) not found ==
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN]
== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN]
== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-3193}}
{{#set: common name=sterol 24C methyltransferase}}
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{{#set: common name=C4 photosynthetic carbon assimilation cycle, NADP-ME type}}
{{#set: gene associated=Tiso_gene_10757|Tiso_gene_11071|Tiso_gene_14051|Tiso_gene_19883|Tiso_gene_3977|Tiso_gene_8895|Tiso_gene_13974|Tiso_gene_15903|Tiso_gene_13588|Tiso_gene_8634|Tiso_gene_10659}}
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{{#set: common name=PCA cycle|C4 photosynthesis, NADP-ME type}}
{{#set: in pathway=}}
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{{#set: reaction found=2}}
{{#set: reconstruction category=orthology}}
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{{#set: total reaction=5}}
{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: completion rate=40.0}}
{{#set: reconstruction tool=pantograph}}
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Revision as of 15:57, 21 March 2018

Pathway PWY-241

  • taxonomic range:
  • common name:
    • C4 photosynthetic carbon assimilation cycle, NADP-ME type
  • Synonym(s):
    • PCA cycle
    • C4 photosynthesis, NADP-ME type

Reaction(s) found

2 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links