Difference between revisions of "PWY3DJ-12"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8770 RXN-8770] == * direction: ** LEFT-TO-RIGHT * common name: ** plastid_phosphoglycerate_muta...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8770 RXN-8770] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** plastid_phosphoglycerate_mutase_protein
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** ceramide de novo biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.73 EC-3.1.3.73]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[ADENOSYLCOBALAMIN-5-P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADENOSYLCOBALAMIN]][c]
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* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 H2O[c] '''+''' 1 adenosylcobalamin 5'-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 adenosylcobalamin[c]
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*** [[Tiso_gene_18518]]
 
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** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
* [[Tiso_gene_16271]]
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* [[RXN-16332]]
** IN-SILICO_ANNOTATION
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** 0 associated gene:
***EC-NUMBER
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** 1 reconstruction source(s) associated:
== Pathways  ==
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*** [[annotation-in-silico_annotation]]
* [[COBALSYN-PWY]], adenosylcobalamin salvage from cobinamide I: [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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* [[RXN3DJ-118]]
** '''2''' reactions found over '''6''' reactions in the full pathway
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** 0 associated gene:
* [[PWY-6269]], adenosylcobalamin salvage from cobinamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6269 PWY-6269]
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** 1 reconstruction source(s) associated:
** '''2''' reactions found over '''7''' reactions in the full pathway
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*** [[annotation-in-silico_annotation]]
* [[PWY-5509]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5509 PWY-5509]
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
** '''2''' reactions found over '''8''' reactions in the full pathway
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** 1 associated gene(s):
== Reconstruction information  ==
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*** [[Tiso_gene_10992]]
* [[annotation]]:
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** 3 reconstruction source(s) associated:
** [[pathwaytools]]:
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*** [[orthology-athaliana]]
*** [[in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30370 30370]
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{{#set: common name=ceramide de novo biosynthesis}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=4}}
{{#set: common name=plastid_phosphoglycerate_mutase_protein}}
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{{#set: total reaction=4}}
{{#set: ec number=EC-3.1.3.73}}
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{{#set: completion rate=100.0}}
{{#set: gene associated=Tiso_gene_16271}}
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{{#set: in pathway=COBALSYN-PWY|PWY-6269|PWY-5509}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:48, 21 March 2018

Pathway PWY3DJ-12

  • taxonomic range:
  • common name:
    • ceramide de novo biosynthesis
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links