Difference between revisions of "PWY3O-19"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXI-RXN GLYOXI-RXN] == * direction: ** REVERSIBLE * common name: ** lactoylglutathione_lyase_fam...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXI-RXN GLYOXI-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** lactoylglutathione_lyase_family_protein_glyoxalase_i_family_protein
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** cis-genanyl-CoA degradation
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* ec number:
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** [http://enzyme.expasy.org/EC/4.4.1.5 EC-4.4.1.5]
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* Synonym(s):
 
* Synonym(s):
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** acyclic terpene utilization pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''9''' reactions in the full pathway
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** 1 [[S-LACTOYL-GLUTATHIONE]][c] '''<=>''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[METHYL-GLYOXAL]][c]
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* [[ACETATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 (R)-S-lactoylglutathione[c] '''<=>''' 1 glutathione[c] '''+''' 1 methylglyoxal[c]
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*** [[Tiso_gene_3617]]
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*** [[Tiso_gene_1612]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_3616]]
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Genes have been associated with this reaction based on different elements listed below.
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** 6 reconstruction source(s) associated:
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* [[Tiso_gene_10185]]
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[synechocystis]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_7507]]
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
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* [[Tiso_gene_19902]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[RXN-11917]]
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***EC-NUMBER
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** 1 associated gene(s):
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_16181]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY-5386]], methylglyoxal degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386]
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*** [[orthology-athaliana]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* [[RXN-11919]]
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* Category: [[orthology]]
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** 1 associated gene(s):
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** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_14257]]
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*** Tool: [[pantograph]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* [[RXN-11921]]
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** Source: [[orthology-esiliculosus]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_16181]]
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* Category: [[annotation]]
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** 2 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.3.26-RXN 4.1.3.26-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=GERANOYL-COA-CARBOXYLASE-RXN GERANOYL-COA-CARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11918 RXN-11918]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11920 RXN-11920]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-MAP:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19069 19069]
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** [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281]
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* LIGAND-RXN:
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* UM-BBD-PWY : cit
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** [http://www.genome.jp/dbget-bin/www_bget?R02530 R02530]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=cis-genanyl-CoA degradation}}
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** [http://www.uniprot.org/uniprot/Q04760 Q04760]
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{{#set: common name=acyclic terpene utilization pathway}}
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** [http://www.uniprot.org/uniprot/P0AC81 P0AC81]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P0A0T3 P0A0T3]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P0A0T2 P0A0T2]
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{{#set: completion rate=44.0}}
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** [http://www.uniprot.org/uniprot/P44638 P44638]
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** [http://www.uniprot.org/uniprot/P0A1Q2 P0A1Q2]
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** [http://www.uniprot.org/uniprot/P46417 P46417]
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** [http://www.uniprot.org/uniprot/Q42891 Q42891]
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** [http://www.uniprot.org/uniprot/Q55595 Q55595]
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** [http://www.uniprot.org/uniprot/Q09751 Q09751]
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** [http://www.uniprot.org/uniprot/Q9XGF2 Q9XGF2]
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** [http://www.uniprot.org/uniprot/P16635 P16635]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=lactoylglutathione_lyase_family_protein_glyoxalase_i_family_protein}}
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{{#set: ec number=EC-4.4.1.5}}
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{{#set: gene associated=Tiso_gene_10185|Tiso_gene_7507|Tiso_gene_19902}}
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{{#set: in pathway=PWY-5386}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:15, 21 March 2018

Pathway PWY-6672

  • taxonomic range:
  • common name:
    • cis-genanyl-CoA degradation
  • Synonym(s):
    • acyclic terpene utilization pathway

Reaction(s) found

4 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY3O-19&oldid=33115"