Difference between revisions of "PWY3O-6"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] == * direction: ** REVERSIBLE * common name: ** ORF * Synonym(s): ** oxalsuccini...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8642 RXN-8642] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** ORF
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** dehydro-D-arabinono-1,4-lactone biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** oxalsuccinic decarboxylase
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** previously called D-erythroascorbate (erythroascorbate, erythroascorbic acid) biosynthesis
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** isocitrate (NADP) dehydrogenase
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
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** NADP-specific isocitrate dehydrogenase
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** NADP-linked isocitrate dehydrogenase
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** NADP isocitric dehydrogenase
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** isocitrate dehydrogenase (NADP-dependent)
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** NADP-dependent isocitric dehydrogenase
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
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** NADP+-linked isocitrate dehydrogenase
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** IDH (ambiguous)
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** dual-cofactor-specific isocitrate dehydrogenase
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** NADP+-ICDH
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** NADP+-IDH
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** IDP
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** IDP1
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** IDP2
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** IDP3
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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* [[1.1.3.37-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H+[c] '''+''' 1 oxalosuccinate[c] '''<=>''' 1 CO2[c] '''+''' 1 2-oxoglutarate[c]
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*** [[Tiso_gene_210]]
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*** [[Tiso_gene_14187]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_6787]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_18262]]
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*** [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.117-RXN 1.1.1.117-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=D-ARABINOSE-1-DEHYDROGENASE-RXN D-ARABINOSE-1-DEHYDROGENASE-RXN]
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* [[Tiso_gene_10809]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
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{{#set: common name=dehydro-D-arabinono-1,4-lactone biosynthesis}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=previously called D-erythroascorbate (erythroascorbate, erythroascorbic acid) biosynthesis}}
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{{#set: common name=ORF}}
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{{#set: reaction found=1}}
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{{#set: common name=oxalsuccinic decarboxylase|isocitrate (NADP) dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|NADP-specific isocitrate dehydrogenase|NADP-linked isocitrate dehydrogenase|NADP isocitric dehydrogenase|isocitrate dehydrogenase (NADP-dependent)|NADP-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|NADP+-linked isocitrate dehydrogenase|IDH (ambiguous)|dual-cofactor-specific isocitrate dehydrogenase|NADP+-ICDH|NADP+-IDH|IDP|IDP1|IDP2|IDP3}}
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{{#set: total reaction=3}}
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{{#set: gene associated=Tiso_gene_18262|Tiso_gene_10809}}
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{{#set: completion rate=33.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:04, 21 March 2018

Pathway PWY3O-6

  • taxonomic range:
  • common name:
    • dehydro-D-arabinono-1,4-lactone biosynthesis
  • Synonym(s):
    • previously called D-erythroascorbate (erythroascorbate, erythroascorbic acid) biosynthesis

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY3O-6&oldid=39319"