Difference between revisions of "PWY66-387"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13300 RXN-13300] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13300 RXN-13300] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
** chloroplast_beta-keto_acyl_reductase
+
** fatty acid α-oxidation II
* ec number:
+
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''4''' reactions found over '''6''' reactions in the full pathway
** 1 [[CPD-14273]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-14277]][c] '''+''' 1 [[NADP]][c]
+
* [[RXN66-469]]
* With common name(s):
+
** 9 associated gene(s):
** 1 3-oxo-lignoceroyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 (3R)-3-hydroxy-lignoceroyl-CoA[c] '''+''' 1 NADP+[c]
+
*** [[Tiso_gene_10876]]
 
+
*** [[Tiso_gene_7855]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_4191]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_9394]]
* [[Tiso_gene_9871]]
+
*** [[Tiso_gene_348]]
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_500]]
***EC-NUMBER
+
*** [[Tiso_gene_135]]
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_13394]]
***EC-NUMBER
+
*** [[Tiso_gene_136]]
== Pathways  ==
+
** 3 reconstruction source(s) associated:
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
+
*** [[annotation-experimental_annotation]]
** '''16''' reactions found over '''16''' reactions in the full pathway
+
*** [[annotation-in-silico_annotation]]
== Reconstruction information  ==
+
*** [[orthology-esiliculosus]]
* [[annotation]]:
+
* [[RXN66-470]]
** [[pathwaytools]]:
+
** 4 associated gene(s):
*** [[experimental_annotation]]
+
*** [[Tiso_gene_14707]]
*** [[in-silico_annotation]]
+
*** [[Tiso_gene_561]]
 +
*** [[Tiso_gene_16200]]
 +
*** [[Tiso_gene_14450]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN66-472]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN66-483]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_348]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_4191]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_9394]]
 +
*** [[Tiso_gene_7855]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=FORMYL-COA-HYDROLASE-RXN FORMYL-COA-HYDROLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-471 RXN66-471]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-33208}}
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: common name=fatty acid α-oxidation II}}
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: reaction found=4}}
{{#set: gene associated=Tiso_gene_9871}}
+
{{#set: total reaction=6}}
{{#set: in pathway=PWY-7036}}
+
{{#set: completion rate=67.0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:08, 21 March 2018

Pathway PWY66-387

  • taxonomic range:
  • common name:
    • fatty acid α-oxidation II
  • Synonym(s):

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links