Difference between revisions of "PWY66-391"

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(Created page with "Category:Gene == Gene Tiso_gene_13682 == * right end position: ** 2763 * transcription direction: ** POSITIVE * left end position: ** 26 * centisome position: ** 0.4233149...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-...")
 
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_13682 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391] ==
* right end position:
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* taxonomic range:
** 2763
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
* transcription direction:
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* common name:
** POSITIVE
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** fatty acid β-oxidation VI (peroxisome)
* left end position:
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** 26
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* centisome position:
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** 0.4233149   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction(s) found ==
* Reaction: [[AMIDASE-RXN]]
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'''5''' reactions found over '''7''' reactions in the full pathway
** Source: [[annotation-in-silico_annotation]]
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* [[ACYLCOASYN-RXN]]
*** Assignment: automated-name-match
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** 9 associated gene(s):
* Reaction: [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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*** [[Tiso_gene_136]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_7855]]
*** Assignment: automated-name-match
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*** [[Tiso_gene_9394]]
** Source: [[orthology-creinhardtii]]
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*** [[Tiso_gene_10876]]
* Reaction: [[PYRAZIN-RXN]]
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*** [[Tiso_gene_4191]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_13394]]
*** Assignment: automated-name-match
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*** [[Tiso_gene_500]]
* Reaction: [[R311-RXN]]
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*** [[Tiso_gene_348]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_135]]
*** Assignment: automated-name-match
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** 3 reconstruction source(s) associated:
* Reaction: [[RXN-14727]]
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*** [[annotation-in-silico_annotation]]
** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
*** Assignment: automated-name-match
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*** [[orthology-esiliculosus]]
* Reaction: [[RXN-14728]]
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* [[ENOYL-COA-HYDRAT-RXN]]
** Source: [[annotation-in-silico_annotation]]
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** 3 associated gene(s):
*** Assignment: automated-name-match
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*** [[Tiso_gene_14262]]
* Reaction: [[RXN-17608]]
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*** [[Tiso_gene_16145]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_6885]]
*** Assignment: automated-name-match
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** 1 reconstruction source(s) associated:
* Reaction: [[RXNN-404]]
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*** [[orthology-esiliculosus]]
** Source: [[annotation-in-silico_annotation]]
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* [[KETOACYLCOATHIOL-RXN]]
*** Assignment: automated-name-match
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** 5 associated gene(s):
== Pathways associated ==
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*** [[Tiso_gene_10116]]
* [[PWY-581]]
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*** [[Tiso_gene_17451]]
* [[PWY-5025]]
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*** [[Tiso_gene_3856]]
* [[PWY-3161]]
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*** [[Tiso_gene_3855]]
* [[ARGDEG-V-PWY]]
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*** [[Tiso_gene_15327]]
* [[PWY-7308]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[OHACYL-COA-DEHYDROG-RXN]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_14027]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11026]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_18566]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7699 RXN-7699]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-485 RXN66-485]
 
== External links  ==
 
== External links  ==
{{#set: right end position=2763}}
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{{#set: taxonomic range=TAX-7742}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=fatty acid β-oxidation VI (peroxisome)}}
{{#set: left end position=26}}
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{{#set: reaction found=5}}
{{#set: centisome position=0.4233149    }}
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{{#set: total reaction=7}}
{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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{{#set: completion rate=71.0}}
{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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Latest revision as of 20:17, 21 March 2018

Pathway PWY66-391

  • taxonomic range:
  • common name:
    • fatty acid β-oxidation VI (peroxisome)
  • Synonym(s):

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links