Difference between revisions of "RETINOL-DEHYDROGENASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_7799 == * right end position: ** 10650 * transcription direction: ** NEGATIVE * left end position: ** 8299 * centisome position: ** 76.8283...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7799 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
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* right end position:
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* direction:
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** 10650
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** all-trans-retinol dehydrogenase (NAD)
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* left end position:
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** dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
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** 8299
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
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** 76.82837   
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* Synonym(s):
 
* Synonym(s):
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** all-trans retinol dehydrogenase
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** retinal reductase
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[ALDEHYDE-REDUCTASE-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c] '''+''' 1 [[NADH]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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* Reaction: [[RXN-12078]]
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** 1 all-trans-retinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 all-trans-retinal[c] '''+''' 1 NADH[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-14102]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_17086]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-8772]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN-8773]]
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* Gene: [[Tiso_gene_18459]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-5515]]
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* [[PWY-5516]]
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* [[PWY-6693]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=10650}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
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{{#set: left end position=8299}}
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* LIGAND-RXN:
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{{#set: centisome position=76.82837    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
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{{#set: reaction associated=ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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* UNIPROT:
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693}}
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** [http://www.uniprot.org/uniprot/P50169 P50169]
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** [http://www.uniprot.org/uniprot/Q64437 Q64437]
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** [http://www.uniprot.org/uniprot/P40394 P40394]
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** [http://www.uniprot.org/uniprot/P50170 P50170]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
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{{#set: common name=dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like}}
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{{#set: ec number=EC-1.1.1.105}}
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{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
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{{#set: gene associated=Tiso_gene_17086|Tiso_gene_18459}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:23, 21 March 2018

Reaction RETINOL-DEHYDROGENASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • all-trans-retinol dehydrogenase (NAD)
    • dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
  • ec number:
  • Synonym(s):
    • all-trans retinol dehydrogenase
    • retinal reductase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 all-trans-retinal[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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