Difference between revisions of "RETINYL-PALMITATE-ESTERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13612 CPD-13612] == * smiles: ** CCCCCCCCCCCCCCCC(C(CO)[N+])O * common name: ** D-erythro-s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13612 CPD-13612] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCCCC(C(CO)[N+])O
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** D-erythro-sphinganine
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** retinyl-palmitate esterase
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* inchi key:
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** ORF
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** InChIKey=OTKJDMGTUTTYMP-ZWKOTPCHSA-O
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** serine_esterase
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* molecular weight:
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** sialate_o-acetylesterase-like_protein
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** 302.519   
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** lysophospholipase
 +
** alpha_beta_hydrolase
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** alpha_beta_hydrolase_fold_protein
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** sphinganine
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** retinyl palmitate hydrolase
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** D-erythro-dihydrosphingosine
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** retinyl palmitate hydrolyase
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** D-erythro-DHS
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** retinyl ester hydrolase
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** D-erythro-dihydrosphingosine (C18)
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−
** D-erythro-sphinganine (C18)
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** dihydrosphingosine
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN3DJ-118]]
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* With identifiers:
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* [[SPHINGANINE-KINASE-RXN]]
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** 1 [[CHOCOLA_A]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Retinols]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[3-DEHYDROSPHINGANINE-REDUCTASE-RXN]]
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** 1 all-trans-retinyl palmitate[c] '''+''' 1 H2O[c] '''=>''' 1 palmitate[c] '''+''' 1 H+[c] '''+''' 1 a retinol[c]
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== Reaction(s) of unknown directionality ==
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* [[RXN-13733]]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4650]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10066]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_4606]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_1538]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19778]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11351]]
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1922]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_9429]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_2556]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12686]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16518]]
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1537]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_17029]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMSP01020001
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46878428 46878428]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB00269
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{{#set: common name=retinyl-palmitate esterase}}
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* CHEMSPIDER:
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{{#set: common name=ORF}}
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** [http://www.chemspider.com/Chemical-Structure.82609.html 82609]
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{{#set: common name=serine_esterase}}
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* CHEBI:
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57817 57817]
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{{#set: common name=lysophospholipase}}
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* METABOLIGHTS : MTBLC57817
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: smiles=CCCCCCCCCCCCCCCC(C(CO)[N+])O}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=D-erythro-sphinganine}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: inchi key=InChIKey=OTKJDMGTUTTYMP-ZWKOTPCHSA-O}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: molecular weight=302.519    }}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: common name=sphinganine|D-erythro-dihydrosphingosine|D-erythro-DHS|D-erythro-dihydrosphingosine (C18)|D-erythro-sphinganine (C18)|dihydrosphingosine}}
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{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
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{{#set: consumed by=RXN3DJ-118|SPHINGANINE-KINASE-RXN}}
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{{#set: gene associated=Tiso_gene_4650|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_1538|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_1922|Tiso_gene_9429|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_16518|Tiso_gene_1537|Tiso_gene_17029}}
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{{#set: produced by=3-DEHYDROSPHINGANINE-REDUCTASE-RXN}}
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{{#set: in pathway=}}
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{{#set: reversible reaction associated=RXN-13733}}
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{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction RETINYL-PALMITATE-ESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • retinyl-palmitate esterase
    • ORF
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • alpha_beta_hydrolase
    • alpha_beta_hydrolase_fold_protein
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):
    • retinyl palmitate hydrolase
    • retinyl palmitate hydrolyase
    • retinyl ester hydrolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-retinyl palmitate[c] + 1 H2O[c] => 1 palmitate[c] + 1 H+[c] + 1 a retinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links









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