Difference between revisions of "RIBONUCLEOSIDE-DIP-REDUCTII-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P] == * smiles: ** C(=O)(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTII-RXN RIBONUCLEOSIDE-DIP-REDUCTII-RXN] ==
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* smiles:
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* direction:
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** C(=O)([O-])C(=O)CC(O)C(O)C(O)COP([O-])(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PJWIPEXIFFQAQZ-PUFIMZNGSA-K
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* common name:
 
* common name:
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** 3-deoxy-D-arabino-heptulosonate 7-phosphate
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** ribonucleoside-diphosphate_reductase
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* molecular weight:
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* ec number:
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** 285.124   
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
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** 3-deoxy-D-arabino-heptulosonate-7-P
 
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** 3-deoxy-arabino-heptulosonate 7-phosphate
 
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** 3-deoxy-arabino-heptulosonate-7-P
 
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** 2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate
 
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** 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate
 
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** 3-deoxy-arabino-heptulonate 7-phosphate
 
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** DAHP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[DAHPSYN-RXN]]
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** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 CDP[c] '''=>''' 1 dCDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized NrdH glutaredoxin-like protein[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_9915]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10138]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_9916]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_10617]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''12''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 2627-73-8
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460215 5460215]
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{{#set: ec number=EC-1.17.4.1}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_9915|Tiso_gene_10138|Tiso_gene_9916|Tiso_gene_10617}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58394 58394]
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{{#set: in pathway=PWY0-166}}
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* BIGG : 2dda7p
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{{#set: reconstruction category=orthology|annotation}}
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* LIGAND-CPD:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04691 C04691]
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: smiles=C(=O)([O-])C(=O)CC(O)C(O)C(O)COP([O-])(=O)[O-]}}
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{{#set: inchi key=InChIKey=PJWIPEXIFFQAQZ-PUFIMZNGSA-K}}
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{{#set: common name=3-deoxy-D-arabino-heptulosonate 7-phosphate}}
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{{#set: molecular weight=285.124    }}
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{{#set: common name=3-deoxy-D-arabino-heptulosonate-7-P|3-deoxy-arabino-heptulosonate 7-phosphate|3-deoxy-arabino-heptulosonate-7-P|2-dehydro-3-deoxy-D-arabino-heptonate 7-phosphate|3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate|3-deoxy-arabino-heptulonate 7-phosphate|DAHP}}
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{{#set: consumed by=3-DEHYDROQUINATE-SYNTHASE-RXN}}
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{{#set: consumed or produced by=DAHPSYN-RXN}}
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Latest revision as of 20:51, 21 March 2018

Reaction RIBONUCLEOSIDE-DIP-REDUCTII-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBONUCLEOSIDE-DIP-REDUCTII-RXN&oldid=44177"