Difference between revisions of "RXN-10711"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Gene == Gene Tiso_gene_9290 == * left end position: ** 2856 * transcription direction: ** NEGATIVE * right end position: ** 6446 * centisome position: ** 30.18389...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] ==
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== Gene Tiso_gene_9290 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2856
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* common name:
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* transcription direction:
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** ferrochelatase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.99.1.1 EC-4.99.1.1]
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** 6446
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* centisome position:
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** 30.183893   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[CDPKIN-RXN]]
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** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 ferroheme b[c] '''+''' 2 H+[c] '''<=>''' 1 Fe2+[c] '''+''' 1 protoporphyrin IX[c]
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* [[DADPKIN-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[DCDPKIN-RXN]]
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* [[Tiso_gene_3284]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[DGDPKIN-RXN]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
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** [[pantograph]]-[[synechocystis]]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[DTDPKIN-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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** in-silico_annotation
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* [[Tiso_gene_15900]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[DUDPKIN-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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** [[pantograph]]-[[athaliana]]
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***ec-number
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** [[pantograph]]-[[synechocystis]]
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* [[GDPKIN-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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** [[pantograph]]-[[creinhardtii]]
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***ec-number
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== Pathways ==
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
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* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
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** in-silico_annotation
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** '''5''' reactions found over '''6''' reactions in the full pathway
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***ec-number
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* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
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* [[RXN-14120]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** in-silico_annotation
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* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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***ec-number
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-14228]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[UDPKIN-RXN]]
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*** [[creinhardtii]]
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** in-silico_annotation
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*** [[synechocystis]]
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***ec-number
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*** [[athaliana]]
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== Pathways associated ==
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*** [[esiliculosus]]
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* [[PWY-7210]]
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* [[annotation]]:
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* [[PWY-7198]]
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** [[pathwaytools]]:
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* [[PWY-7176]]
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*** [[experimental_annotation]]
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* [[PWY-7220]]
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*** [[in-silico_annotation]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2856}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6446}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
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{{#set: centisome position=30.183893    }}
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* UNIPROT:
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{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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** [http://www.uniprot.org/uniprot/P22830 P22830]
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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** [http://www.uniprot.org/uniprot/P22315 P22315]
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** [http://www.uniprot.org/uniprot/P28602 P28602]
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** [http://www.uniprot.org/uniprot/Q05338 Q05338]
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** [http://www.uniprot.org/uniprot/P42043 P42043]
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** [http://www.uniprot.org/uniprot/P23871 P23871]
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** [http://www.uniprot.org/uniprot/P32396 P32396]
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** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
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** [http://www.uniprot.org/uniprot/P56107 P56107]
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** [http://www.uniprot.org/uniprot/O67083 O67083]
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** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
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** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
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** [http://www.uniprot.org/uniprot/P22600 P22600]
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** [http://www.uniprot.org/uniprot/P43868 P43868]
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** [http://www.uniprot.org/uniprot/P16622 P16622]
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** [http://www.uniprot.org/uniprot/Q59735 Q59735]
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** [http://www.uniprot.org/uniprot/P43413 P43413]
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** [http://www.uniprot.org/uniprot/P54225 P54225]
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** [http://www.uniprot.org/uniprot/P42045 P42045]
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** [http://www.uniprot.org/uniprot/O64391 O64391]
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** [http://www.uniprot.org/uniprot/P42044 P42044]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ferrochelatase}}
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{{#set: ec number=EC-4.99.1.1}}
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{{#set: gene associated=Tiso_gene_3284|Tiso_gene_15900}}
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{{#set: in pathway=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:13, 18 March 2018

Gene Tiso_gene_9290

  • left end position:
    • 2856
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6446
  • centisome position:
    • 30.183893
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10711&oldid=22790"