Difference between revisions of "RXN-10711"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_9290 == * left end position: ** 2856 * transcription direction: ** NEGATIVE * right end position: ** 6446 * centisome position: ** 30.18389...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** sialate_o-acetylesterase-li...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_9290 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
−
* left end position:
+
* direction:
−
** 2856
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** sialate_o-acetylesterase-like_protein
−
* right end position:
+
** protein_chloroplastic
−
** 6446
+
** alpha_beta_hydrolase_fold_protein
−
* centisome position:
+
** serine_esterase
−
** 30.183893   
+
** ORF
 +
** lysophospholipase
 +
** alpha_beta_hydrolase
 +
** para-nitrobenzyl_esterase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[CDPKIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[METOH]][c]
−
***ec-number
+
* With common name(s):
−
* [[DADPKIN-RXN]]
+
** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 H+[c] '''+''' 1 methanol[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[DCDPKIN-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_2556]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[DGDPKIN-RXN]]
+
*** Assignment: EC-NUMBER
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_4650]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[DTDPKIN-RXN]]
+
*** Assignment: EC-NUMBER
−
** in-silico_annotation
+
** Source: [[orthology-esiliculosus]]
−
***ec-number
+
* Gene: [[Tiso_gene_17029]]
−
* [[DUDPKIN-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
* Gene: [[Tiso_gene_10066]]
−
* [[GDPKIN-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
* Gene: [[Tiso_gene_4606]]
−
* [[NUCLEOSIDE-DIP-KIN-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
* Gene: [[Tiso_gene_19778]]
−
* [[RXN-14120]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
* Gene: [[Tiso_gene_11351]]
−
* [[RXN-14228]]
+
** Source: [[annotation-experimental_annotation]]
−
** in-silico_annotation
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***ec-number
+
* Gene: [[Tiso_gene_9429]]
−
* [[UDPKIN-RXN]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: EC-NUMBER
−
***ec-number
+
* Gene: [[Tiso_gene_1922]]
−
== Pathways associated ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7210]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-7198]]
+
* Gene: [[Tiso_gene_12686]]
−
* [[PWY-7176]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7220]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-7184]]
+
* Gene: [[Tiso_gene_1538]]
−
* [[PWY-7222]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7205]]
+
* Gene: [[Tiso_gene_16518]]
−
* [[PWY-7224]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7197]]
+
* Gene: [[Tiso_gene_1537]]
−
* [[PWY0-166]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7227]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[PPGPPMET-PWY]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7226]]
+
== Pathways  ==
−
* [[PWY-7221]]
+
* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
−
* [[PWY-6545]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7187]]
+
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2856}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=sialate_o-acetylesterase-like_protein}}
−
{{#set: right end position=6446}}
+
{{#set: common name=protein_chloroplastic}}
−
{{#set: centisome position=30.183893    }}
+
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
−
{{#set: reaction associated=CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
+
{{#set: common name=serine_esterase}}
−
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
+
{{#set: common name=ORF}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_2556|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_10066|Tiso_gene_4606|Tiso_gene_19778|Tiso_gene_11351|Tiso_gene_9429|Tiso_gene_1922|Tiso_gene_12686|Tiso_gene_1538|Tiso_gene_16518|Tiso_gene_1537}}
 +
{{#set: in pathway=PWY-6303}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:28, 21 March 2018

Reaction RXN-10711

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • sialate_o-acetylesterase-like_protein
    • protein_chloroplastic
    • alpha_beta_hydrolase_fold_protein
    • serine_esterase
    • ORF
    • lysophospholipase
    • alpha_beta_hydrolase
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6303, methyl indole-3-acetate interconversion: PWY-6303
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10711&oldid=41842"