Difference between revisions of "RXN-11056"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FATTY-ACYL-COA-SYNTHASE-RXN FATTY-ACYL-COA-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16131 RXN-16131] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FATTY-ACYL-COA-SYNTHASE-RXN FATTY-ACYL-COA-SYNTHASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16131 RXN-16131] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** polyketide_synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/1.3.1.93 EC-1.3.1.93]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** n [[MALONYL-COA]][c] '''+''' 4n [[PROTON]][c] '''+''' 2n [[NADPH]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 2n [[NADP]][c] '''+''' n [[CARBON-DIOXIDE]][c] '''+''' 1 [[Long-Chain-Acyl-CoAs]][c] '''+''' n [[CO-A]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[CPD-17383]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-17331]][c]
 
* With common name(s):
 
* With common name(s):
−
** n malonyl-CoA[c] '''+''' 4n H+[c] '''+''' 2n NADPH[c] '''+''' 1 acetyl-CoA[c] '''=>''' 2n NADP+[c] '''+''' n CO2[c] '''+''' 1 a long-chain acyl-CoA[c] '''+''' n coenzyme A[c]
+
** 1 NADPH[c] '''+''' 1 (2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_13394]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_135]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_500]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_136]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_10876]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5970]], fatty acids biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5970 PWY-5970]
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05190 R05190]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P34229 P34229]
 
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
 
−
** [http://www.uniprot.org/uniprot/P34731 P34731]
 
−
** [http://www.uniprot.org/uniprot/Q9UUG0 Q9UUG0]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: ec number=EC-1.3.1.93}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: in pathway=PWY-7606}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_135|Tiso_gene_500|Tiso_gene_136|Tiso_gene_10876}}
+
−
{{#set: in pathway=PWY-5970}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 17:09, 21 March 2018

Reaction RXN-16131

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 (2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 H+[c] => 1 NADP+[c] + 1 (9Z,12Z,15Z,18Z,21Z)-tetracosapentaenoyl-CoA[c]

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11056&oldid=39200"