Difference between revisions of "RXN-11369"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionin...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11369 RXN-11369] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11369 RXN-11369] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** s-adenosylmethionine_decarboxylase_proenzyme
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** 1 [[CPD-8652]][c] '''+''' 1 [[DOPAQUINONE]][c] '''=>''' 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[L-DOPACHROME]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 H+[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
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** 1 leucodopachrome[c] '''+''' 1 dopaquinone[c] '''=>''' 1 L-dopa[c] '''+''' 1 L-dopachrome[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Tiso_gene_4269]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
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* Gene: [[Tiso_gene_11030]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-athaliana]]
 
−
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
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* [[PWY-6481]], L-dopachrome biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6481 PWY-6481]
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** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
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** [http://www.genome.jp/dbget-bin/www_bget?R03672 R03672]
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* UNIPROT:
+
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** [http://www.uniprot.org/uniprot/P82184 P82184]
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** [http://www.uniprot.org/uniprot/P21182 P21182]
+
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** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
+
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** [http://www.uniprot.org/uniprot/P17707 P17707]
+
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** [http://www.uniprot.org/uniprot/P28918 P28918]
+
−
** [http://www.uniprot.org/uniprot/P17708 P17708]
+
−
** [http://www.uniprot.org/uniprot/P50243 P50243]
+
−
** [http://www.uniprot.org/uniprot/P46255 P46255]
+
−
** [http://www.uniprot.org/uniprot/Q04694 Q04694]
+
−
** [http://www.uniprot.org/uniprot/Q42679 Q42679]
+
−
** [http://www.uniprot.org/uniprot/Q42829 Q42829]
+
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** [http://www.uniprot.org/uniprot/P79888 P79888]
+
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** [http://www.uniprot.org/uniprot/O04009 O04009]
+
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** [http://www.uniprot.org/uniprot/O24575 O24575]
+
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** [http://www.uniprot.org/uniprot/Q43820 Q43820]
+
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** [http://www.uniprot.org/uniprot/Q39676 Q39676]
+
−
** [http://www.uniprot.org/uniprot/Q39677 Q39677]
+
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** [http://www.uniprot.org/uniprot/O49972 O49972]
+
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** [http://www.uniprot.org/uniprot/O65354 O65354]
+
−
** [http://www.uniprot.org/uniprot/O02655 O02655]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=s-adenosylmethionine_decarboxylase_proenzyme}}
+
{{#set: in pathway=PWY-6481}}
−
{{#set: ec number=EC-4.1.1.50}}
+
{{#set: reconstruction category=annotation}}
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{{#set: gene associated=Tiso_gene_4269|Tiso_gene_11030}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: in pathway=ARGSPECAT-PWY|BSUBPOLYAMSYN-PWY|PWY-6834}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 21:25, 21 March 2018

Reaction RXN-11369

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-6481, L-dopachrome biosynthesis: PWY-6481
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links



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