Difference between revisions of "RXN-11520"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACID-COA-TRANSFERASE-RXN 3-OXOACID-COA-TRANSFERASE-RXN] == * direction: ** REVERSIBLE * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-OXOACID-COA-TRANSFERASE-RXN 3-OXOACID-COA-TRANSFERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.3.5 EC-2.8.3.5]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[SUC-COA]][c] '''+''' 1 [[A-3-OXO-ACID]][c] '''<=>''' 1 [[SUC]][c] '''+''' 1 [[3-KETOACYL-COA]][c]
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** 1 [[WATER]][c] '''+''' 1 [[1-7-DIMETHYLXANTHINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-12483]][c]
 
* With common name(s):
 
* With common name(s):
** 1 succinyl-CoA[c] '''+''' 1 a 3-oxo acid[c] '''<=>''' 1 succinate[c] '''+''' 1 a 3-oxoacyl-CoA[c]
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** 1 H2O[c] '''+''' 1 paraxanthine[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 1,7-dimethylurate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Tiso_gene_6754]]
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* Gene: [[Tiso_gene_11775]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
 
== Pathways  ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[orthology]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01780 R01780]
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** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
* UNIPROT:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.uniprot.org/uniprot/Q29551 Q29551]
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{{#set: gene associated=Tiso_gene_11775}}
** [http://www.uniprot.org/uniprot/Q9RZA0 Q9RZA0]
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{{#set: in pathway=PWY-6632}}
** [http://www.uniprot.org/uniprot/Q9D0K2 Q9D0K2]
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{{#set: reconstruction category=orthology}}
** [http://www.uniprot.org/uniprot/Q09450 Q09450]
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{{#set: reconstruction source=orthology-athaliana}}
{{#set: direction=REVERSIBLE}}
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{{#set: reconstruction tool=pantograph}}
{{#set: common name=succinyl-_:3-ketoacid-coenzyme_a_transferase_mitochondrial}}
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{{#set: ec number=EC-2.8.3.5}}
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{{#set: gene associated=Tiso_gene_6754}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:41, 21 March 2018

Reaction RXN-11520

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links