Difference between revisions of "RXN-12002"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=A-GALACTOSYLCERAMIDE A-GALACTOSYLCERAMIDE] == * common name: ** a β-D-galactosyl-N-acylsph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] == * direction: ** LEFT-TO-RIGHT * common name: ** ump-cmp_kinase ** cytidylat...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=A-GALACTOSYLCERAMIDE A-GALACTOSYLCERAMIDE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a β-D-galactosyl-N-acylsphingosine
+
** ump-cmp_kinase
 +
** cytidylate_kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.22 EC-2.7.4.22]
 +
** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
 
* Synonym(s):
 
* Synonym(s):
−
** a galactosylceramide
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-18301]]
+
* With identifiers:
−
* [[RXN-18302]]
+
** 1 [[ATP]][c] '''+''' 1 [[UMP]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[ADP]][c]
−
== Reaction(s) known to produce the compound ==
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 ATP[c] '''+''' 1 UMP[c] '''=>''' 1 UDP[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_17057]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14116]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2386]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9739]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_19734]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a β-D-galactosyl-N-acylsphingosine}}
+
* RHEA:
−
{{#set: common name=a galactosylceramide}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24400 24400]
−
{{#set: consumed by=RXN-18301|RXN-18302}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00158 R00158]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ump-cmp_kinase}}
 +
{{#set: common name=cytidylate_kinase}}
 +
{{#set: ec number=EC-2.7.4.22}}
 +
{{#set: ec number=EC-2.7.4.14}}
 +
{{#set: gene associated=Tiso_gene_17057|Tiso_gene_14116|Tiso_gene_2386|Tiso_gene_9739|Tiso_gene_19734}}
 +
{{#set: in pathway=PWY-7176}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:07, 21 March 2018

Reaction RXN-12002

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ump-cmp_kinase
    • cytidylate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 UMP[c] => 1 UDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12002&oldid=46050"