Difference between revisions of "RXN-12184"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** structure-specific_en...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12258 CPD-12258] == * smiles: ** CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.22.4-RXN 3.1.22.4-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12258 CPD-12258] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)
 
* common name:
 
* common name:
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** structure-specific_endonuclease_subunit_slx1_homolog
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** UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/3.1.22.4 EC-3.1.22.4]
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** InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K
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* molecular weight:
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** 1075.843   
 
* Synonym(s):
 
* Synonym(s):
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** UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)
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** UDP-MurNAc-tetrapeptide
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-11347]]
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** 1 [[DNA-Combined-With-Exogenous-DNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Resolution-of-Recombinational-Junction]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 DNA combined with exogenous DNA to form a recombinational junction[c] '''+''' 1 H2O[c] '''=>''' 1 resolution of recombinational junction formation of two intact strands[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11797]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P0A814 P0A814]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658175 90658175]
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** [http://www.uniprot.org/uniprot/P44633 P44633]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O83530 O83530]
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** [http://www.genome.jp/dbget-bin/www_bget?C06432 C06432]
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** [http://www.uniprot.org/uniprot/O84510 O84510]
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{{#set: smiles=CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)}}
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** [http://www.uniprot.org/uniprot/O25544 O25544]
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{{#set: common name=UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine}}
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** [http://www.uniprot.org/uniprot/Q9PLU8 Q9PLU8]
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{{#set: inchi key=InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K}}
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** [http://www.uniprot.org/uniprot/Q51424 Q51424]
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{{#set: molecular weight=1075.843    }}
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** [http://www.uniprot.org/uniprot/Q37873 Q37873]
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{{#set: common name=UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)|UDP-MurNAc-tetrapeptide}}
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** [http://www.uniprot.org/uniprot/P0AG74 P0AG74]
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{{#set: consumed by=RXN-11347}}
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** [http://www.uniprot.org/uniprot/Q55506 Q55506]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=structure-specific_endonuclease_subunit_slx1_homolog}}
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{{#set: ec number=EC-3.1.22.4}}
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{{#set: gene associated=Tiso_gene_11797}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 16:31, 21 March 2018

Metabolite CPD-12258

  • smiles:
    • CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)
  • common name:
    • UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
  • inchi key:
    • InChIKey=FOEDSVRZGQIXSP-XSOIKTQOSA-K
  • molecular weight:
    • 1075.843
  • Synonym(s):
    • UDP-Mur2Ac(oyl-L-Ala-g-D-Glu-L-Lys-D-Ala)
    • UDP-MurNAc-tetrapeptide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)NC(=O)C(C)OC1(C(O)C(CO)OC(C(NC(=O)C)1)OP(OP(OCC2(OC(C(O)C(O)2)N3(C=CC(=O)NC(=O)3)))([O-])=O)([O-])=O)" cannot be used as a page name in this wiki.



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