Difference between revisions of "RXN-12244"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THREO-DS-ISO-CITRATE THREO-DS-ISO-CITRATE] == * smiles: ** C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] == * direction: ** LEFT-TO-RIGHT * common name: ** 15-cis-phytoene desaturase...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THREO-DS-ISO-CITRATE THREO-DS-ISO-CITRATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] ==
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* smiles:
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* direction:
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** C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ODBLHEXUDAPZAU-ZAFYKAAXSA-K
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* common name:
 
* common name:
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** D-threo-isocitrate
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** 15-cis-phytoene desaturase
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* molecular weight:
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** 189.101   
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* Synonym(s):
 
* Synonym(s):
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** D-threo-isocitrate
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** phytoene desaturase (ambiguous)
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** (1R, 2S)-1-hydroxypropane-1,2,3-tricarboxylate
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** PDS
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** D-threo-isocitric acid
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** plant-type phytoene desaturase
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** isocitric acid
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** isocitrate
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** threo-Ds-isocitrate
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** I-CIT
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** D-isocitrate
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[PLASTOQUINONE]][c] '''+''' 1 [[CPD-13171]][c] '''=>''' 1 [[Plastoquinols]][c] '''+''' 1 [[CPD-7535]][c]
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* [[ACONITATEHYDR-RXN]]
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* With common name(s):
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* [[ISOCITDEH-RXN]]
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** 1 a plastoquinone[c] '''+''' 1 15,9'-di-cis-phytofluene[c] '''=>''' 1 a plastoquinol[c] '''+''' 1 9,15,9'-tri-cis-ζ-carotene[c]
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* [[RXN-14047]]
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* [[ISOCIT-CLEAV-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-9951]]
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== Pathways  ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[manual]]
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** Source: [[manual-reactions_pwy-6475_tiso_add]]
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*** Comment: [[reaction added to complete pwy-6475]]
 
== External links  ==
 
== External links  ==
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* CAS : 320-77-4
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* RHEA:
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* CAS : 30810-51-6
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
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* METABOLIGHTS : MTBLC15562
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=15-cis-phytoene desaturase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459771 5459771]
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{{#set: common name=phytoene desaturase (ambiguous)|PDS|plant-type phytoene desaturase}}
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* KNAPSACK : C00001188
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{{#set: in pathway=PWY-6475}}
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* HMDB : HMDB01874
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{{#set: reconstruction category=manual}}
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* LIGAND-CPD:
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{{#set: reconstruction source=manual-reactions_pwy-6475_tiso_add}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00451 C00451]
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{{#set: reconstruction comment=reaction added to complete pwy-6475}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4573553.html 4573553]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15562 15562]
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* BIGG : icit
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{{#set: smiles=C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-]}}
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{{#set: inchi key=InChIKey=ODBLHEXUDAPZAU-ZAFYKAAXSA-K}}
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{{#set: common name=D-threo-isocitrate}}
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{{#set: molecular weight=189.101    }}
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{{#set: common name=D-threo-isocitrate|(1R, 2S)-1-hydroxypropane-1,2,3-tricarboxylate|D-threo-isocitric acid|isocitric acid|isocitrate|threo-Ds-isocitrate|I-CIT|D-isocitrate}}
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{{#set: consumed or produced by=ACONITATEHYDR-RXN|ISOCITDEH-RXN|RXN-14047|ISOCIT-CLEAV-RXN|RXN-9951}}
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Latest revision as of 21:16, 21 March 2018

Reaction RXN-12244

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 15-cis-phytoene desaturase
  • Synonym(s):
    • phytoene desaturase (ambiguous)
    • PDS
    • plant-type phytoene desaturase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a plastoquinone[c] + 1 15,9'-di-cis-phytofluene[c] => 1 a plastoquinol[c] + 1 9,15,9'-tri-cis-ζ-carotene[c]

Genes associated with this reaction

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12244&oldid=47372"