Difference between revisions of "RXN-12244"

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(Created page with "Category:Gene == Gene Tiso_gene_19905 == * left end position: ** 32 * transcription direction: ** POSITIVE * right end position: ** 1141 * centisome position: ** 1.6528925...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] == * direction: ** LEFT-TO-RIGHT * common name: ** 15-cis-phytoene desaturase...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_19905 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] ==
* left end position:
+
* direction:
** 32
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** 15-cis-phytoene desaturase
* right end position:
+
** 1141
+
* centisome position:
+
** 1.6528925   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** phytoene desaturase (ambiguous)
 +
** PDS
 +
** plant-type phytoene desaturase
  
== Reactions associated ==
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== Reaction Formula ==
* [[CYTOCHROME-B5-REDUCTASE-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[PLASTOQUINONE]][c] '''+''' 1 [[CPD-13171]][c] '''=>''' 1 [[Plastoquinols]][c] '''+''' 1 [[CPD-7535]][c]
***ec-number
+
* With common name(s):
** [[pantograph]]-[[athaliana]]
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** 1 a plastoquinone[c] '''+''' 1 15,9'-di-cis-phytofluene[c] '''=>''' 1 a plastoquinol[c] '''+''' 1 9,15,9'-tri-cis-ζ-carotene[c]
* [[RXN-11195]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
***ec-number
+
== Pathways  ==
== Pathways associated ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[manual]]
 +
** Source: [[manual-reactions_pwy-6475_tiso_add]]
 +
*** Comment: [[reaction added to complete pwy-6475]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=32}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
{{#set: right end position=1141}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=1.6528925    }}
+
{{#set: common name=15-cis-phytoene desaturase}}
{{#set: reaction associated=CYTOCHROME-B5-REDUCTASE-RXN|RXN-11195}}
+
{{#set: common name=phytoene desaturase (ambiguous)|PDS|plant-type phytoene desaturase}}
 +
{{#set: in pathway=PWY-6475}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-reactions_pwy-6475_tiso_add}}
 +
{{#set: reconstruction comment=reaction added to complete pwy-6475}}

Latest revision as of 21:16, 21 March 2018

Reaction RXN-12244

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 15-cis-phytoene desaturase
  • Synonym(s):
    • phytoene desaturase (ambiguous)
    • PDS
    • plant-type phytoene desaturase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a plastoquinone[c] + 1 15,9'-di-cis-phytofluene[c] => 1 a plastoquinol[c] + 1 9,15,9'-tri-cis-ζ-carotene[c]

Genes associated with this reaction

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links