Difference between revisions of "RXN-12252"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase ** pol...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4659 == * left end position: ** 10639 * transcription direction: ** POSITIVE * right end position: ** 11632 * centisome position: ** 72.844...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] ==
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== Gene Tiso_gene_4659 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 10639
* common name:
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* transcription direction:
** 3-oxoacyl-synthase
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** POSITIVE
** polyketide_synthase
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* right end position:
* ec number:
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** 11632
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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** 72.84492   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 a palmitoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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== Pathways associated ==
 
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* [[PWY-6386]]
== Genes associated with this reaction  ==
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* [[PWY-6387]]
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5939]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=10639}}
{{#set: common name=3-oxoacyl-synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=polyketide_synthase}}
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{{#set: right end position=11632}}
{{#set: ec number=EC-2.3.1.86}}
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{{#set: centisome position=72.84492    }}
{{#set: ec number=EC-2.3.1.41}}
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{{#set: reaction associated=UDPNACETYLMURAMATEDEHYDROG-RXN}}
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_15991|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_136|Tiso_gene_19302|Tiso_gene_10876|Tiso_gene_5939|Tiso_gene_135}}
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{{#set: pathway associated=PWY-6386|PWY-6387}}
{{#set: in pathway=PWY3O-355}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:27, 10 January 2018

Gene Tiso_gene_4659

  • left end position:
    • 10639
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11632
  • centisome position:
    • 72.84492
  • Synonym(s):

Reactions associated

Pathways associated

External links