Difference between revisions of "RXN-12375"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.67-RXN 2.4.1.67-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12375 RXN-12375] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine_-n1)-methyltr...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.67-RXN 2.4.1.67-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12375 RXN-12375] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** trna_(guanine_-n1)-methyltransferase
 +
** probable_trna_(guanine_-n_)-dimethyltransferase_1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.67 EC-2.4.1.67]
+
** [http://enzyme.expasy.org/EC/2.1.1.216 EC-2.1.1.216]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-1099]][c] '''+''' 1 [[CPD-458]][c] '''<=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[CPD-170]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Guanine26-in-tRNA]][c] '''=>''' 1 [[tRNA-Containing-N2-Methylguanine-26]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 raffinose[c] '''+''' 1 galactinol[c] '''<=>''' 1 myo-inositol[c] '''+''' 1 stachyose[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a guanine26 in tRNA[c] '''=>''' 1 an N2-methylguanine26 in tRNA[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8673]]
+
* Gene: [[Tiso_gene_9360]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_16101]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_16307]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5337]], stachyose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337]
+
* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20776 20776]
+
{{#set: common name=trna_(guanine_-n1)-methyltransferase}}
−
* LIGAND-RXN:
+
{{#set: common name=probable_trna_(guanine_-n_)-dimethyltransferase_1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03418 R03418]
+
{{#set: ec number=EC-2.1.1.216}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=Tiso_gene_9360|Tiso_gene_16307}}
−
{{#set: ec number=EC-2.4.1.67}}
+
{{#set: in pathway=PWY-6829}}
−
{{#set: gene associated=Tiso_gene_8673|Tiso_gene_16101}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PWY-5337}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 21:18, 21 March 2018

Reaction RXN-12375

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_(guanine_-n1)-methyltransferase
    • probable_trna_(guanine_-n_)-dimethyltransferase_1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6829, tRNA methylation (yeast): PWY-6829
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12375&oldid=47703"