Difference between revisions of "RXN-12560"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase * ec numbe...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12560 RXN-12560] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** phosphopantothenate biosynthesis II
+
** polyketide_synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[PANTOTHENATE-KIN-RXN]]
+
** 1 [[NADP]][c] '''+''' 1 [[CPD-13533]][c] '''<=>''' 1 [[CPD-13534]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_4467]]
+
** 1 NADP+[c] '''+''' 1 (R)-3-hydroxyvaleryl-CoA[c] '''<=>''' 1 &beta;-ketovaleryl-CoA[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
−
*** [[Tiso_gene_4468]]
+
 
−
** 2 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-in-silico_annotation]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-esiliculosus]]
+
* Gene: [[Tiso_gene_5424]]
−
== Reaction(s) not found ==
+
** Source: [[annotation-in-silico_annotation]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.168-RXN 1.1.1.168-RXN]
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6401 RXN-6401]
+
* Gene: [[Tiso_gene_10876]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-3398}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=phosphopantothenate biosynthesis II}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: reaction found=1}}
+
{{#set: ec number=EC-1.1.1.36}}
−
{{#set: total reaction=3}}
+
{{#set: gene associated=Tiso_gene_5424|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_5425|Tiso_gene_500|Tiso_gene_6562|Tiso_gene_13394|Tiso_gene_135|Tiso_gene_6563}}
−
{{#set: completion rate=33.0}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:49, 21 March 2018

Reaction RXN-12560

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 (R)-3-hydroxyvaleryl-CoA[c] <=> 1 β-ketovaleryl-CoA[c] + 1 NADPH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12560&oldid=43990"