Difference between revisions of "RXN-12871"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12871 RXN-12871] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12871 RXN-12871] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* ec number:
 
** [http://enzyme.expasy.org/EC/3.2.2.16 EC-3.2.2.16]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-560]][c]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-13913]][c] '''=>''' 1 [[CPD-13912]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 S-methyl-5'-thioadenosine[c] '''+''' 1 H2O[c] '''=>''' 1 adenine[c] '''+''' 1 S-methyl-5-thio-D-ribose[c]
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** 1 H2O[c] '''+''' 1 2-carboxy-L-xylonolactone[c] '''=>''' 1 2-carboxy-L-threo-pentonate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Tiso_gene_12855]]
 
** Source: [[orthology-creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY0-1391]], S-methyl-5'-thioadenosine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1391 PWY0-1391]
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* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6754]], S-methyl-5'-thioadenosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6754 PWY-6754]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[annotation]]
** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pantograph]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13617 13617]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01401 R01401]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-3.2.2.16}}
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{{#set: in pathway=PWY-6959}}
{{#set: gene associated=Tiso_gene_12855}}
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{{#set: reconstruction category=annotation}}
{{#set: in pathway=PWY0-1391|PWY-6754}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=orthology-creinhardtii}}
+
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:25, 21 March 2018

Reaction RXN-12871

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 2-carboxy-L-xylonolactone[c] => 1 2-carboxy-L-threo-pentonate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-6959, L-ascorbate degradation V: PWY-6959
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links