Difference between revisions of "RXN-12893"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12893 RXN-12893] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec numb...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12893 RXN-12893] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** cyanate_hydratase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.5.1.7 EC-1.5.1.7]
+
** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[NADH]][c]
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** 3 [[PROTON]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[CPD-69]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 L-saccharopine[c] '''=>''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 L-lysine[c] '''+''' 1 NADH[c]
+
** 3 H+[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 cyanate[c] '''=>''' 2 CO2[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[Tiso_gene_1156]]
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* Gene: [[Tiso_gene_15128]]
** Source: [[orthology-athaliana]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
 
** '''3''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[annotation]]
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pantograph]]
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*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12440 12440]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00715 R00715]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07315 R07315]
* UNIPROT:
+
** [http://www.uniprot.org/uniprot/P38997 P38997]
+
** [http://www.uniprot.org/uniprot/P38998 P38998]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-1.5.1.7}}
+
{{#set: common name=cyanate_hydratase}}
{{#set: gene associated=Tiso_gene_1156}}
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{{#set: ec number=EC-4.2.1.104}}
{{#set: in pathway=LYSINE-AMINOAD-PWY}}
+
{{#set: gene associated=Tiso_gene_15128}}
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=}}
{{#set: reconstruction source=orthology-athaliana}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:08, 21 March 2018

Reaction RXN-12893

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cyanate_hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 3 H+[c] + 1 hydrogencarbonate[c] + 1 cyanate[c] => 2 CO2[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links