Difference between revisions of "RXN-13279"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13279 RXN-13279] == * direction: ** REVERSIBLE * common name: ** polyketide_synthase * ec numbe...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLEOYL-RXN LINOLEOYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13279 RXN-13279] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** polyketide_synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.2 EC-3.1.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-18]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[NADP]][c] '''+''' 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 linoleoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 linoleate[c] '''+''' 1 H+[c] '''+''' 1 coenzyme A[c]
+
** 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxyacyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7477]]
+
* Gene: [[Tiso_gene_10876]]
−
** [[pantograph]]-[[athaliana]]
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** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_801]]
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*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_136]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6563]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_500]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5425]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5424]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6562]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_135]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13394]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08177 R08177]
+
{{#set: common name=polyketide_synthase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-1.1.1.36}}
−
{{#set: ec number=EC-3.1.2}}
+
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_136|Tiso_gene_6563|Tiso_gene_500|Tiso_gene_5425|Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_135|Tiso_gene_13394}}
−
{{#set: gene associated=Tiso_gene_7477|Tiso_gene_801}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6917}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=creinhardtii|athaliana}}
+

Latest revision as of 20:55, 21 March 2018

Reaction RXN-13279

  • direction:
    • REVERSIBLE
  • common name:
    • polyketide_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13279&oldid=44619"