Difference between revisions of "RXN-13617"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UREA UREA] == * smiles: ** C(=O)(N)N * common name: ** urea * inchi key: ** InChIKey=XSQUKJJJFZ...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UREA UREA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] ==
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* smiles:
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* direction:
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** C(=O)(N)N
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** urea
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** thiolase
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* inchi key:
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** acetyl-_c-acetyltransferase
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** InChIKey=XSQUKJJJFZCRTK-UHFFFAOYSA-N
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** 3-ketoacyl-_thiolase
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* molecular weight:
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* ec number:
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** 60.055   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
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** bromisovalum
 
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** carmol
 
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** basodexan
 
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** carbamide
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[AGMATIN-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD0-2123]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-196]][c]
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* [[GUANIDINOBUTYRASE-RXN]]
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* With common name(s):
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* [[CREATINASE-RXN]]
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** 1 coenzyme A[c] '''+''' 1 3-oxodecanoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 octanoyl-CoA[c]
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* [[ALLANTOICASE-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[ARGINASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRANS-RXN0-460]]
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* Gene: [[Tiso_gene_3856]]
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* [[UREASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3855]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10116]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_16181]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_15327]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 57-13-6
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* RHEA:
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* DRUGBANK : DB03904
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31089 31089]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=1176 1176]
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** [http://www.genome.jp/dbget-bin/www_bget?R03778 R03778]
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* HMDB : HMDB00294
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=thiolase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00086 C00086]
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{{#set: common name=acetyl-_c-acetyltransferase}}
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* CHEMSPIDER:
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{{#set: common name=3-ketoacyl-_thiolase}}
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** [http://www.chemspider.com/Chemical-Structure.1143.html 1143]
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{{#set: ec number=EC-2.3.1.16}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_16181|Tiso_gene_15327}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16199 16199]
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{{#set: in pathway=PWY-7094}}
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* METABOLIGHTS : MTBLC16199
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=C(=O)(N)N}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus}}
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{{#set: common name=urea}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=XSQUKJJJFZCRTK-UHFFFAOYSA-N}}
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{{#set: molecular weight=60.055    }}
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{{#set: common name=bromisovalum|carmol|basodexan|carbamide}}
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{{#set: produced by=AGMATIN-RXN|GUANIDINOBUTYRASE-RXN|CREATINASE-RXN|ALLANTOICASE-RXN}}
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{{#set: reversible reaction associated=ARGINASE-RXN|TRANS-RXN0-460|UREASE-RXN}}
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Latest revision as of 20:51, 21 March 2018

Reaction RXN-13617

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 3-oxodecanoyl-CoA[c] => 1 acetyl-CoA[c] + 1 octanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13617&oldid=44217"