Difference between revisions of "RXN-14179"

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(Created page with "Category:Gene == Gene Tiso_gene_7552 == * right end position: ** 3838 * transcription direction: ** POSITIVE * left end position: ** 3165 * centisome position: ** 28.64253...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14179 RXN-14179] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_beta-g...")
 
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_7552 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14179 RXN-14179] ==
* right end position:
+
* direction:
** 3838
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
* left end position:
+
** ORF
** 3165
+
** beta_glucosidase
* centisome position:
+
** beta-glucosidase-like_chloroplastic
** 28.642536   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* Reaction: [[RXN0-4261]]
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* With identifiers:
 +
** 1 [[SCOPOLIN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[SCOPOLETIN]][c]
 +
* With common name(s):
 +
** 1 scopolin[c] '''+''' 1 H2O[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 scopoletin[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6188]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15066]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13306]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6497]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8669]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2843]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13305]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5836]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10001]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15067]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_2344]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6187]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3467]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6007]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: automated-name-match
+
*** Tool: [[pathwaytools]]
== Pathways associated ==
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: right end position=3838}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
{{#set: left end position=3165}}
+
{{#set: common name=ORF}}
{{#set: centisome position=28.642536    }}
+
{{#set: common name=beta_glucosidase}}
{{#set: reaction associated=RXN0-4261}}
+
{{#set: common name=beta-glucosidase-like_chloroplastic}}
 +
{{#set: ec number=EC-3.2.1.21}}
 +
{{#set: gene associated=Tiso_gene_6188|Tiso_gene_15066|Tiso_gene_13306|Tiso_gene_6497|Tiso_gene_8669|Tiso_gene_2843|Tiso_gene_13305|Tiso_gene_5836|Tiso_gene_10001|Tiso_gene_15067|Tiso_gene_2344|Tiso_gene_6187|Tiso_gene_3467|Tiso_gene_6007}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:09, 21 March 2018

Reaction RXN-14179

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • low_quality_protein:_beta-glucosidase-like_chloroplastic-like
    • ORF
    • beta_glucosidase
    • beta-glucosidase-like_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links