Difference between revisions of "RXN-14219"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_14300 == * right end position: ** 9977 * transcription direction: ** POSITIVE * left end position: ** 8194 * centisome position: ** 80.6178...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14219 RXN-14219] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * Synonym(s): == React...")
 
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_14300 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14219 RXN-14219] ==
* right end position:
+
* direction:
** 9977
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** ORF
* left end position:
+
** 8194
+
* centisome position:
+
** 80.61787   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* Reaction: [[AMINOCYL-TRNA-HYDROLASE-RXN]]
+
* With identifiers:
** Source: [[annotation-in-silico_annotation]]
+
** 1 [[DUTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DUDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
*** Assignment: ec-number
+
* With common name(s):
 +
** 1 dUTP[c] '''+''' 1 H2O[c] '''=>''' 1 dUDP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_20236]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
* Reaction: [[RXN-12460]]
+
* Gene: [[Tiso_gene_12899]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: ec-number
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
* Reaction: [[RXN-16637]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
== Pathways associated ==
+
* [[PWY490-4]]
+
* [[PWY-6308]]
+
 
== External links  ==
 
== External links  ==
{{#set: right end position=9977}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=ORF}}
{{#set: left end position=8194}}
+
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
{{#set: centisome position=80.61787    }}
+
{{#set: in pathway=}}
{{#set: reaction associated=AMINOCYL-TRNA-HYDROLASE-RXN|RXN-12460|RXN-16637}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: pathway associated=PWY490-4|PWY-6308}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:37, 21 March 2018

Reaction RXN-14219

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dUTP[c] + 1 H2O[c] => 1 dUDP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links