Difference between revisions of "RXN-14277"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15005 RXN-15005] == * direction: ** LEFT-TO-RIGHT * common name: ** acetylglutamate_kinase * ec...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] == * direction: ** REVERSIBLE * common name: ** hexanoyl-CoA C-acyltransferase...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15005 RXN-15005] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** acetylglutamate_kinase
+
** hexanoyl-CoA C-acyltransferase
 +
** thiolase
 +
** acetyl-_c-acetyltransferase
 +
** 3-ketoacyl-_thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.2.8 EC-2.7.2.8]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[LysW-L-glutamate]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[LysW-L-glutamate-5-phosphate]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[ACETYL-COA]][c] '''+''' 1 [[HEXANOYL-COA]][c] '''<=>''' 1 [[CPD0-2106]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an [L-2-aminoadipate carrier protein]-L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 an [L-2-aminoadipate carrier protein]-L-glutamate 5-phosphate[c] '''+''' 1 ADP[c]
+
** 1 acetyl-CoA[c] '''+''' 1 hexanoyl-CoA[c] '''<=>''' 1 3-oxooctanoyl-CoA[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_13144]]
+
* Gene: [[Tiso_gene_17451]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_3856]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16181]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
* Category: [[annotation]]
−
*** [[in-silico_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=acetylglutamate_kinase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31205 31205]
−
{{#set: ec number=EC-2.7.2.8}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_13144}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04747 R04747]
−
{{#set: in pathway=PWY-7400}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=hexanoyl-CoA C-acyltransferase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=thiolase}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_16181}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:22, 21 March 2018

Reaction RXN-14277

  • direction:
    • REVERSIBLE
  • common name:
    • hexanoyl-CoA C-acyltransferase
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 acetyl-CoA[c] + 1 hexanoyl-CoA[c] <=> 1 3-oxooctanoyl-CoA[c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14277&oldid=48143"