Difference between revisions of "RXN-16540"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** xylitol_oxidas...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 +
** acyl-coenzyme_a_oxidase
 
** ORF
 
** ORF
−
** xylitol_oxidase
+
** acyl-_dehydrogenase
−
** mitochondrial_l-galactono-_-lactone_dehydrogenase
+
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.3.37 EC-1.1.3.37]
+
** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-356]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 D-arabinono-1,4-lactone[c] '''=>''' 1 dehydro-D-arabinono-1,4-lactone[c] '''+''' 1 hydrogen peroxide[c]
+
** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_210]]
+
* Gene: [[Tiso_gene_6475]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_14187]]
+
* Gene: [[Tiso_gene_5991]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_6787]]
+
* Gene: [[Tiso_gene_16631]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18566]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_883]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17967]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6]
+
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=acyl-coenzyme_a_oxidase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=xylitol_oxidase}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
+
{{#set: common name=acyl-CoA_dehydrogenase}}
−
{{#set: ec number=EC-1.1.3.37}}
+
{{#set: ec number=EC-1.3.8.9}}
−
{{#set: gene associated=Tiso_gene_210|Tiso_gene_14187|Tiso_gene_6787}}
+
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5991|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_883|Tiso_gene_17967}}
−
{{#set: in pathway=PWY3O-6}}
+
{{#set: in pathway=PWY-7654|PWY-7656}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:07, 21 March 2018

Reaction RXN-16540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 palmitoyl-CoA[c] => 1 trans-hexadec-2-enoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16540&oldid=39652"