Difference between revisions of "RXN-16629"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-276 RXN1G-276] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-delta1...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16629 RXN-16629] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** 3-oxoacyl-synthase |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[Oleoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[11Z-3-oxo-icos-11-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 an oleoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[Tiso_gene_5939]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY-7663]], gondoate biosynthesis (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * Category: [[ | + | * Category: [[annotation]] |
| − | ** Source: [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[ | + | *** Tool: [[pathwaytools]] |
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=3-oxoacyl-synthase}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_5939}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-7663}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 21:01, 21 March 2018
Contents
Reaction RXN-16629
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Oleoyl-ACPs[c] + 1 PROTON[c] + 1 MALONYL-ACP[c] => 1 CARBON-DIOXIDE[c] + 1 11Z-3-oxo-icos-11-enoyl-ACPs[c] + 1 ACP[c]
- With common name(s):
- 1 an oleoyl-[acp][c] + 1 H+[c] + 1 a malonyl-[acp][c] => 1 CO2[c] + 1 an (11Z)-3-oxo-icos-11-enoyl-[acp][c] + 1 a holo-[acyl-carrier protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-7663, gondoate biosynthesis (anaerobic): PWY-7663
- 3 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
